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View Structure Prediction Details

Protein: gi|90093300, gi|...
Organism: Arabidopsis thaliana
Length: 361 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|90093300, gi|....

Description E-value Query
Range
Subject
Range
gi|9294602 - gi|9294602|dbj|BAB02903.1| hydrolase-like protein [Arabidopsis thaliana]
224.0 [0..59] [361..7]

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Predicted Domain #1
Region A:
Residues: [1-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAMSAVLSL GLGTLRPSHR SLSCFDSLRH HQTSFLRCHQ SLISRNTTRS PLNKILQACL  60
   61 QSNSANGDAL VSSSDESSEI VFMGTGTSEG IPRVSCLTNP LKTCSVCTKA TEPGNRNRRL 120
  121 NTSILVRYIR PSGTSNILID CGKFFYHSAL RWFPTFGLRT LDAVVITHSH ADAIGGLDDL 180
  181 RDWTNNVQPH IPIYTAIRDL EVMKKTHYYL VDTSVIIPGA AVSELEFKVI HEDQPFVVND 240
  241 LKITPLPVWH GSNYRSLGFR FGNVCYISDV SDIPEETYPL LKDCDLLIMD ALRPDRSSAT 300
  301 HFGLPRALEE VRKIKPKRTL FTGMMHLMDH EKVSEELEKL RNTEGLDVQL SYDGLRVPIS 360
  361 I

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Detection Method: PSI-BLAST
Confidence: 35.0
Match: 1y44A
Description: Crystal structure of RNase Z
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.941400907161877 bayes_pls_golite062009
binding 0.0620440235827893 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle