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View Structure Prediction Details

Protein: gi|110743293, gi...
Organism: Arabidopsis thaliana
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110743293, gi....

Description E-value Query
Range
Subject
Range
gi|21592783 - gi|21592783|gb|AAM64732.1| contains similarity to regulatory protein RecX [Arabidopsis thaliana]
480.0 [0..1] [382..1]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLGFRLAI GIQHHRLFRI PWAKRHSVPR ILCSEQRDYC SSGLTKYVPK KSRKITEDLT  60
   61 SQQFDVTRVD HSVLGFQVKG NSKEARDGSF LDLQEENDTG SYTNVSCDDS DEGFMSLDKG 120
  121 IDASRLDHSV LGSKVKANIK ETGEDTDFHL RDKNDADMYS DVSCDDSNDE SSNEVRSTGY 180
  181 KSTRQHKQAY DKIKLHLEAE QAKSSKEAC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [210-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTTQDAEHMA IRYLGLRAYS AADLKKKLIG KKYPIEVVDK VIDDFQIRGF VNDSLYAESF  60
   61 TRSRWSSLSW GPRRIKQALF KKGISNKDSE TAIKLVFEKR QCNEGDEEAE LNHGLSKEAV 120
  121 DQLYVQASKR WLQGRDLPTE TRKTRVIRWL QYRGFNWGVV TQLLKRLEST HES

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle