| Protein: | gi|42570789 |
| Organism: | Arabidopsis thaliana |
| Length: | 500 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42570789.
| Description | E-value | Query Range |
Subject Range |
|
|
925.0 | [0..13] | [500..16] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MLLSFSNNFN NKLFAATIND ESETPGRDRL IGGLLTADFD EGSCLSRYHK TFLYRKPSPY 60
61 KPSEYLVSKL RSYEMLHKRC GPGTKAYKEA TKHLSHDENY NASKSDGECR YVVWLADY
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.610 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.610 | a.24.21 | Description not found. |
| View | Download | 0.563 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.482 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.459 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.363 | a.118.8 | TPR-like |
| View | Download | 0.363 | a.118.8 | TPR-like |
| View | Download | 0.337 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.290 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.282 | d.110.4 | SNARE-like |
|
Region A: Residues: [119-500] |
1 11 21 31 41 51
| | | | | |
1 GLGNRLLTLA SVFLYALLTD RIILVDNRKD IGDLLCEPFP GTSWLLPLDF PLMKYADGYH 60
61 KGYSRCYGTM LENHSINSTS FPPHLYMHNL HDSRDSDKMF FCQKDQSLID KVPWLIFRAN 120
121 VYFVPSLWFN PTFQTELTKL FPQKETVFHH LGRYLFHPKN QVWDIVTKYY HDHLSKADER 180
181 LGIQIRVFRD QGGYYQHVMD QVISCTQREK LLPELATQEE SKVNISNIPK SKAVLVTSLS 240
241 PEYSKKLENM FSERANMTGE IIKVYQPSGE RYQQTDKKVH DQKALAEMYL LSLTDNIVAS 300
301 SRSTFGYVAY SLGGLKPWLL YLPNDNKAPD PPCVRSTSME PCFLTPPTHG CEPDAWGTES 360
361 GKVVPFVRYC EDIWGLKLFD EL
|
| Detection Method: | |
| Confidence: | 4.4 |
| Match: | 2hhcA |
| Description: | No description for 2hhcA was found. |
