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View Structure Prediction Details

Protein: TPK2_ARATH
Organism: Arabidopsis thaliana
Length: 267 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPK2_ARATH.

Description E-value Query
Range
Subject
Range
gi|18406621, gi|... - gi|20197027|gb|AAC27477.2| putative thiamin pyrophosphokinase [Arabidopsis thaliana], gi|20148329|gb...
346.0 [0..1] [267..1]

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Predicted Domain #1
Region A:
Residues: [1-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAMDVMIH SSSFLLPCDE TCGTRYALVV LNQNLPRFTP LLWEHAKLRL CADGGANRIY  60
   61 DELPLFFPHE DPFVIRNRYK PDVIKGDMDS IRRDVLDFYV YWGTKVIDES HDQDTTDLDK 120
  121 CISYIRHSTL NQESSRLQIL ATGALGGRFD HEAGNLNVLY RYPDTRIVLL SDDCLIQLLP 180
  181 KTHRHEIHIH SSLQGPHCGL IPIGTPSANT TTSGLKWDLS NTEMRFGGLI STSNLVKEEI 240
  241 ITVESDSDLL WTISIKKTGL PVQDHKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.0
Match: 1ig3A
Description: Thiamin pyrophosphokinase, substrate-binding domain; Thiamin pyrophosphokinase, catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle