| Protein: | SIPL3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 540 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIPL3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
422.0 | [0..26] | [528..25] |
|
Region A: Residues: [1-245] |
1 11 21 31 41 51
| | | | | |
1 MSSFDPPNHR YSALVLILLL LGFSVAAADD VSWTEDSSLE SPGCTNKFQM VKVLNWVDGV 60
61 EGDFLTGLTA QFGAALPSVP DQALRFPAAF VDPLDSCSHL SSRLDGHIAL SIRGNCAFTE 120
121 KAKHAEAAGA SALLVINDKE DLDEMGCMEK DTSLNVSIPV LMISKSSGDA LNKSMVDNKN 180
181 VELLLYAPKR PAVDLTAGLL LLMAVGTVVV ASLWSELTDP DQANESYSIL AKDVSSAGTR 240
241 KDDPE
|
| Detection Method: |  |
| Confidence: | 22.0 |
| Match: | 1xf1A |
| Description: | Structure of C5a peptidase- a key virulence factor from Streptococcus |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [246-322] |
1 11 21 31 41 51
| | | | | |
1 KEILDISVTG AVFFIVTASI FLLLLFYFMS SWFVWVLTIF FCIGGMQGMH NIIMAVILRK 60
61 CRHLARKSVK LPLLGTM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [323-412] |
1 11 21 31 41 51
| | | | | |
1 SVLSLLVNIV CLAFAVFWFI KRHTSYSWVG QDILGICLMI TALQVVRLPN IKVATVLLCC 60
61 AFVYDIFWVF ISPLIFHESV MIVVAQGDSS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [413-540] |
1 11 21 31 41 51
| | | | | |
1 TGESIPMLLR IPRFFDPWGG YDMIGFGDIL FPGLLISFAS RYDKIKKRVI SNGYFLWLTI 60
61 GYGIGLLLTY LGLYLMDGHG QPALLYIVPC TLGLAVILGL VRGELKELWN YGIEESESHT 120
121 PEDPMPVA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
