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View Structure Prediction Details

Protein: gi|161339209, gi...
Organism: Arabidopsis thaliana
Length: 158 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|161339209, gi....

Description E-value Query
Range
Subject
Range
gi|73975944 - gi|73975944|ref|XP_851415.1| PREDICTED: similar to Protection of telomeres 1 (hPot1) (POT1-like telo...
207.0 [0..5] [158..307]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKRDSPKL IKIKDAIKLI NQEVSLIGIV LEQREPKQCR NNDWICTLRI IDDTYPSPGL  60
   61 TVNVYSRTLE QLPQIKNHDD MILFTRIKAQ RVFIFLVCFV EEMQTFDSGK RVNAACSRWV 120
  121 SSFALFEGED LILHADEDTS AVFVWDGTDA PPASILAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.0
Match: 1xjvA
Description: Crystal structure of human POT1 bound to telomeric single-stranded DNA (TTAGGGTTAG)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.141433535514844 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle