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View Structure Prediction Details

Protein: gi|30687969
Organism: Arabidopsis thaliana
Length: 431 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30687969.

Description E-value Query
Range
Subject
Range
gi|17065474, gi|... - gi|23197704|gb|AAN15379.1| Unknown protein [Arabidopsis thaliana], gi|20197047|gb|AAB97122.2| expres...
372.0 [0..12] [431..12]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTTTTNTMA MLQNLVFSVP ISRMVVRRHS LATTFSAAAT TVVPSPKPVS AKPARTPHVD  60
   61 SHVLIGMSEP ELQELAINLV LIFQEGYRGK QLHHLIYKRK VNKVEDFSNL PLTFRKGLVD 120
  121 GGFKVGRSPI YQTVTATDGT IKLLLKLEDN LLIETVGIPV Q

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [162-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDEKGITRLT ACVSSQVGCP LRCSFCATGK GGFSRNLQRH EIIEQVLAIE DVFKHRVTNV  60
   61 VFMGMGEPML NLKSVLDAHR CLNKDIEIGQ RMITISTVGV PNTIKKLASH KLQSTLAVSL 120
  121 HAPNQSLREK IVPSAKAYPL EAIMKDCRDY FQETNRRVSF EYALLAGVND QVEHAVELAE 180
  181 LLREWGKTYH VNLIPYNPIE GSEYQRPYKK AVLAFAAALE SRKITASVRQ TRGLDASAAC 240
  241 GQLRNKFQKS PLLTETDSQE SQPDAEAVAC 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 1tv7A
Description: Structure of the S-adenosylmethionine dependent Enzyme MoaA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.48331922124015 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle