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View Structure Prediction Details

Protein: gi|42571129
Organism: Arabidopsis thaliana
Length: 235 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571129.

Description E-value Query
Range
Subject
Range
gi|48310209, gi|... - gi|50198897|gb|AAT70468.1| At2g39000 [Arabidopsis thaliana], gi|48310209|gb|AAT41775.1| At2g39000 [A...
189.0 [0..2] [235..58]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGACNASQIV DLFPAVSPEI VVREARLEDC WEVAETHCSS FFPGYSFPLD VVLRVDRLMA  60
   61 MVMGFSIPPG CQRTCLVAVI GSSVDETICF GSDDFKIGAF DAKISLNKGY VAGILTVDTV 120
  121 ADYLPRKGPL RQRRTGIAYV SNVAVRENFR RKGIAKRLIW KAEALAKNWG CRAIGLHCDL 180
  181 NNLGATKLYK DQGFRSIKIP EGATWPQPKT SPDTRFTFMM KLVNNNNTQA LEQFR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 1yr0A
Description: Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.44927632341056 bayes_pls_golite062009
transferase activity 1.29638283412179 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.25574147031095 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.14025367092848 bayes_pls_golite062009
acyltransferase activity 1.11249291357784 bayes_pls_golite062009
N-acyltransferase activity 0.756613127653639 bayes_pls_golite062009
acetyltransferase activity 0.71069229070011 bayes_pls_golite062009
N-acetyltransferase activity 0.4223042426612 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle