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View Structure Prediction Details

Protein: FEI2_ARATH
Organism: Arabidopsis thaliana
Length: 589 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FEI2_ARATH.

Description E-value Query
Range
Subject
Range
gi|12322537, gi|... - pir||B86440 probable protein kinase [imported] - Arabidopsis thaliana, gi|12322537|gb|AAG51266.1|AC...
363.0 [0..1] [589..1]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGICLMKRCC SWFLLISFLS ALTNENEAIS PDGEALLSFR NGVLASDGVI GLWRPEDPDP  60
   61 CNWKGVTCDA KTKRVIALSL TYHKLRGPLP PELGKLDQLR LLMLH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.045757
Match: 1ogqA
Description: Polygalacturonase inhibiting protein PGIP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [106-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNALYQSIPA SLGNCTALEG IYLQNNYITG TIPSEIGNLS GLKNLDLSNN NLNGAIPASL  60
   61 GQLKRLTKFN VSNNFLVGKI PSDGLLARLS RDSFNGNRNL CGKQIDIVCN DSGNSTASGS 120
  121 PTGQGGNNPK RLLISASATV GGLLLVALMC FWGCFLYKKL GRVESKSL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.02
Match: 1ogqA
Description: Polygalacturonase inhibiting protein PGIP
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [274-589]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIDVGGGASI VMFHGDLPYA SKDIIKKLES LNEEHIIGCG GFGTVYKLSM DDGNVFALKR  60
   61 IVKLNEGFDR FFERELEILG SIKHRYLVNL RGYCNSPTSK LLLYDYLPGG SLDEALHKRG 120
  121 EQLDWDSRVN IIIGAAKGLA YLHHDCSPRI IHRDIKSSNI LLDGNLEARV SDFGLAKLLE 180
  181 DEESHITTIV AGTFGYLAPE YMQSGRATEK TDVYSFGVLV LEVLSGKLPT DASFIEKGFN 240
  241 IVGWLNFLIS ENRAKEIVDL SCEGVERESL DALLSIATKC VSSSPDERPT MHRVVQLLES 300
  301 EVMTPCPSDF YDSSSD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.69897
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle