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View Structure Prediction Details

Protein: P2C29_ARATH
Organism: Arabidopsis thaliana
Length: 783 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2C29_ARATH.

Description E-value Query
Range
Subject
Range
gi|25341907, gi|... - gi|3608153|gb|AAC36186.1| hypothetical protein [Arabidopsis thaliana], pir||E84767 hypothetical prot...
487.0 [0..1] [742..1]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSGFSSLLP CFNQGHRNRR RHSSAANPSH SDLIDSFREP LDETLGHSYC YVPSSSNRFI  60
   61 SPFPSDRFVS PTASFRLSPP HEPGRIRGSG SSEQLHTGFR AISGASVSAN TSNSKTVLQL 120
  121 EDIYD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [126-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DATESSFGGG VRRSVVNANG FEGTSSFSAL PLQPGPDRSG LFMSGPIERG ATSGPLDPPA  60
   61 GEISRSNSAG VHFSAPLGGV YSKKRRKKKK KSLSWHPIFG GEKKQRPWVL PVSNFV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [242-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGAKKENIVR PDVEAMAASS GENDLQWALG KAGEDRVQLA VFEKQGWLFA GIYDGFNGPD  60
   61 APEFLMANLY RAVHSELQGL FWELEEEDDN PTDISTRELE QQGEFEDHVN EMASSSCPAT 120
  121 EKEEEEMG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.65
Match: 2i44A
Description: No description for 2i44A was found.

Predicted Domain #4
Region A:
Residues: [370-783]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRLTSSLEVV EVKERKRLWE LLAEAQAEDA LDLSGSDRFA FSVDDAIGAG NAVSVGSKRW  60
   61 LLLSKLKQGL SKQGISGRKL FPWKSGVEEN ETEEVDNVGV EEGVDKRRKR RKAGTVDHEL 120
  121 VLKAMSNGLE ATEQAFLEMT DKVLETNPEL ALMGSCLLVA LMRDDDVYIM NIGDSRALVA 180
  181 QYQVEETGES VETAERVEER RNDLDRDDGN KEPLVVDSSD STVNNEAPLP QTKLVALQLT 240
  241 TDHSTSIEDE VTRIKNEHPD DNHCIVNDRV KGRLKVTRAF GAGFLKQPKL NDALLEMFRN 300
  301 EYIGTDPYIS CTPSLRHYRL TENDQFMVLS SDGLYQYLSN VEVVSLAMEK FPDGDPAQHV 360
  361 IQELLVRAAK KAGMDFHELL DIPQGDRRKY HDDCTVLVIA LGGSRIWKSS GKYL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.39794
Match: 2p8eA
Description: No description for 2p8eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle