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View Structure Prediction Details

Protein: IP5P8_ARATH
Organism: Arabidopsis thaliana
Length: 479 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IP5P8_ARATH.

Description E-value Query
Range
Subject
Range
gi|4056496, gi|2... - gi|4056496|gb|AAC98062.1| unknown protein [Arabidopsis thaliana], pir||G84792 hypothetical protein A...
418.0 [0..82] [479..1]

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Predicted Domain #1
Region A:
Residues: [1-479]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKILKSKSS WPRTVVRKWL NLRSGAYEFH SDYPVKGMEP RRKSCSDMIV PENFQGWLGQ  60
   61 GNGDLKHSTG EQHVTRVDDK LDLKMFVGTW NVGGKSPHEG LDLKDWLKSP ADADIYVLGF 120
  121 QEIVPLNAGN VLGAEDNGPA AKWLSLIREA LNNTNNLSPN ELEHTKSSQQ PRFSFSGLSD 180
  181 DTPIPCNSTP PRGYSLAASK QMVGIFLCVW VRDDLRKRIT NLKVSCVGRG IMGYLGNKGS 240
  241 VSISMSLHET SLCFVCTHLT SGEKEGDELR RNLDVTEIFK RTRFSRSSKD SRPETIMDHD 300
  301 KVIWLGDLNY RLRASSDLHE QLRNHDWESL LEKDQLKIEQ RAGRIFKGWE EGKIYFAPTY 360
  361 KYRINSDNYV VQTEKSKEKR RTPAWCDRIL WKGDGMKQLW YVRGESKFSD HRPVQSLFSV 420
  421 HIDLKNQSNR KTKPVNQNHR PNPVLTYTCH GKVQAEEILL LTRAQSCIDT LPRLISSAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.30103
Match: 1i9yA
Description: Synaptojanin, IPP5C domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle