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View Structure Prediction Details

Protein: gi|42570377, gi|...
Organism: Arabidopsis thaliana
Length: 171 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42570377, gi|....

Description E-value Query
Range
Subject
Range
gi|29649090 - gi|29649090|gb|AAO86845.1| hypothetical protein [Arabidopsis thaliana]
181.0 [0..1] [171..1]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDDLPDWRN KLEPVFLEFE DGCVPEEHYY PCIRRREDEE PKISAEEEYY LMVKEVEDSK  60
   61 GFDIDFAKFR CVFNYRPVDL DD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.805 a.74.1 Cyclin-like

Predicted Domain #2
Region A:
Residues: [83-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NELALEPETT REFMDRLCRK SLEHFNEIHS TKYEFVRFIK ANHHVSAGMM YFITFEGKLL  60
   61 SNDDDSKQFQ AKLCYCGGTP EIISCELKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 1eqkA
Description: Phytocystatin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle