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View Structure Prediction Details

Protein: gi|30685195
Organism: Arabidopsis thaliana
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30685195.

Description E-value Query
Range
Subject
Range
gi|30685200 - gi|30685200|ref|NP_180775.2| unknown protein [Arabidopsis thaliana]
721.0 [0..1] [415..1]

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Predicted Domain #1
Region A:
Residues: [1-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISSSEMMAT EKAPEFVTAM ATETERIGNS REVDEEKISR KKNPEEEALE AKCLPGIISA  60
   61 YLNYPKAAEE NLKKCERSYQ KLSPAHKALV THFPMKLQRL RRCILMNSHF IYNMLQAFEP 120
  121 PIDLSKHMRE PITGALSMEE LQREEHHHDH SLKNAEIRLN NKTCEFDGGH LNHDHGSAHV 180
  181 PLVDVNKVRW VIRNIVRDWG AEGQRERDEC YKPILEELDS LFPDRHKEST RPACLVPGAG 240
  241 LGRLALEISC LGFRSQGNEV SYYMMLCSSF ILNYTQLPGE WTIYPWIHTN CNSLSDDDQL 300
  301 RPISIPDIHP ASAGVTESFS MCRGDFVEVF NESSQAGMWD AVVTCFFIDT AHNIIEYIET 360
  361 ISKILKDGGV LINLGPLLYH FADEQGLENE MSIELSLEDV KRVASHYGFE MEKKQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.976
Match: 1kywA
Description: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 1.0221592961184 bayes_pls_golite062009
transcription factor activity 0.999980840846358 bayes_pls_golite062009
catalytic activity 0.403277401956396 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle