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View Structure Prediction Details

Protein: BGAL8_ARATH
Organism: Arabidopsis thaliana
Length: 852 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for BGAL8_ARATH.

Predicted Domain #1
Region A:
Residues: [1-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP  60
   61 EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY DLVKFVKLAA KAGLYVHLRI 120
  121 GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI 180
  181 ILSQIENEYG NIDSAYGAAA KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY 240
  241 CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG 300
  301 GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS 360
  361 LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN LPAWSVSILP DCKNVAFNTA 420
  421 KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK 480
  481 SDYLWYSLRT DIKGDETFLD EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI 540
  541 NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.69897
Match: 3d3aA
Description: No description for 3d3aA was found.

Predicted Domain #2
Region A:
Residues: [575-749]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVTLKSAKGG SSIDLASQQW TYQVGLKGED TGLATVDSSE WVSKSPLPTK QPLIWYKTTF  60
   61 DAPSGSEPVA IDFTGTGKGI AWVNGQSIGR YWPTSIAGNG GCTESCDYRG SYRANKCLKN 120
  121 CGKPSQTLYH VPRSWLKPSG NILVLFEEMG GDPTQISFAT KQTGSNLCLT VSQSH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [750-852]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPVDTWTSD SKISNRNRTR PVLSLKCPIS TQVIFSIKFA SFGTPKGTCG SFTQGHCNSS  60
   61 RSLSLVQKAC IGLRSCNVEV STRVFGEPCR GVVKSLAVEA SCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 2jx9A
Description: No description for 2jx9A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle