| Protein: | gi|186503523, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 506 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|186503523, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
401.0 | [0..1] | [506..1] |
|
|
288.0 | [0..72] | [451..641] |
|
|
268.0 | [0..129] | [506..165] |
|
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268.0 | [0..129] | [506..165] |
|
|
258.0 | [0..110] | [456..49] |
|
|
258.0 | [0..110] | [456..49] |
|
|
257.0 | [0..145] | [456..143] |
|
|
256.0 | [0..71] | [456..2] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MTRILVQRGS SGSSSNSSRP SSSSSSSSGS ETQINNNIPV PPVTIDEEIT DEKQEEVTVV 60
61 EKAECSDAKD VAVDSDEPAD REDDEGLVVA ENVHVQSEGI DCDSPVSGGS NSDSPPVPAP 120
121 PPKPSSTVNP GSNRSVLGSF GALRIGPTRR AAGPRSLVSS RSSPTGSHPS S
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [172-421] |
1 11 21 31 41 51
| | | | | |
1 PRSHSENEGY NSSDEHMPCY VPSHPGSGLE REHQFEAEIR YSKGFEIRRM LEDGNCLFRA 60
61 VADQVYGDSE AYDLARQMCM DYMEQERDHF SQFITEGFTS YLKRKRRDKV YGNNVEIQAL 120
121 AEMYNRPIHI YSYSTEPINI FQGNYSTDTP PIRLSYHHGN HYNSLVDPHR LTVGAGLGFS 180
181 SLSGRHVDKE QVKAAIKAQQ EHQIDNALLA EGRFYSDLEL TEKEIERSVM EASRAEYLME 240
241 WSKPRIGPKE
|
| Detection Method: | |
| Confidence: | 2.77 |
| Match: | 1tffA |
| Description: | Structure of Otubain-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [422-506] |
1 11 21 31 41 51
| | | | | |
1 SSTSNAETSS SGATGPSGSD SKPAEAVKEK TVLSSSIEMV LSMGFSYAQA MEAYSIFGDD 60
61 VDSMVCYVLE TSCGGNNRRK GKATE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.723 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.621 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.621 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.600 | a.39.1 | EF-hand |
| View | Download | 0.573 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.561 | a.240.1 | Description not found. |
| View | Download | 0.558 | a.4.1 | Homeodomain-like |
| View | Download | 0.502 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.458 | a.74.1 | Cyclin-like |
| View | Download | 0.450 | a.240.1 | Description not found. |
| View | Download | 0.414 | a.240.1 | Description not found. |
| View | Download | 0.376 | a.4.1 | Homeodomain-like |
