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View Structure Prediction Details

Protein: FAP2_ARATH
Organism: Arabidopsis thaliana
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|29649081 - gi|29649081|gb|AAO86844.1| hypothetical protein [Arabidopsis thaliana]
512.0 [0..1] [398..1]

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Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNMDPNSVL PKRSFLQHEL FSQLHIPGSL AFEAFSCISK FTGALLCWFS HGNLQKEVSK  60
   61 HQWGLTCKSR DSLKHVFEHR NVSVFPFHYV SKDISPGFFG NISKSTIQHF VNEAERLHSC 120
  121 SLLSLAAAMI PSLNVMSANG LALPLGSNDV KLRENIEHRT CPENTEHRTC QVGCEEYS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [179-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLSFQKLDWT RQSVEPRTGI EFPMLLKENA SRSNSEVLVA TGSRTMKIIR IKSLKVYAFG  60
   61 FYVHPSSVCQ KLGRKYASVP ASKLDKCDDL YKDLLREDIV MSVRLVVNYN GLKINTVRDV 120
  121 FEKSLRARLV KANPKTDFNC LNDFGSFFRQ DIPIPAGTII DFRRTEDGQL ITEIGGNLIG 180
  181 AVRSKDLCRA FFGMYIGDVP VSEQTKEEIG RKVVGIIKRC 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.0
Match: 1eypA
Description: Chalcone isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle