| Protein: | gi|30682917 |
| Organism: | Arabidopsis thaliana |
| Length: | 787 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30682917.
| Description | E-value | Query Range |
Subject Range |
|
|
763.0 | [0..1] | [787..1] |
|
Region A: Residues: [1-537] |
1 11 21 31 41 51
| | | | | |
1 MVSTQQRTDD DSSQPVKASL KSYGITEPLS IAGPSAADVK RNLELEKFLV DEGLYESKEE 60
61 TMRREEVVVR IDQIVKHWVK QLTRQRGYTD QMVEDANAVI FTFGSYRLGV HGPMADIDTL 120
121 CVGPSYVNRE EDFFIFFRDI LAEMEEVTEL QPVTDAHVPV MKFKFQGISI DLLYASISLL 180
181 VIPQDLDISN SSVLCDVDEQ TVRSLNGCRV ADQILKLVPN SEHFRTTLRC LKYWAKKRGV 240
241 YSNVTGFLGG VNWALLVARL CQFYPNAIPS MLVSRFFRVY TQWRWPNPVM LCAIEEDDLS 300
301 FPVWDPRKNH RDRYHLMPII TPAYPCMNSS YNVSQSTLRV MTEQFQFGNT ICQEIELNKQ 360
361 HWSSLFQQYM FFEAYKNYLQ VDVLAADAED LLAWKGWVES RFRQLTLKIE RDTNGMLMCH 420
421 PQPNEYVDTS KQFRHCAFFM GLQRADGFGG QECQQFDIRG TVDEFRQEVN MYMFWRPGMD 480
481 VHVSHVRRRQ LPSFVFPNGY KRSRQSRHQS QQCREPGDEG VGSLSDSVER YAKRKND
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1f5aA |
| Description: | Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.122769147009 | bayes_pls_golite062009 |
| RNA binding | 1.07207584601969 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.92178707322923 | bayes_pls_golite062009 |
| polynucleotide adenylyltransferase activity | 0.911825870004661 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.667889614569279 | bayes_pls_golite062009 |
| transferase activity | 0.63270331673446 | bayes_pls_golite062009 |
|
Region A: Residues: [538-635] |
1 11 21 31 41 51
| | | | | |
1 DEIMNSRPEK REKRASCSLH TLDAASPDSS GITTSGTPQI GIVPGPRAEC LVTGDLVCNV 60
61 TSLPNVEVEA EKFISKITEL RKFSQYEHTS GSEQILEV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [636-787] |
1 11 21 31 41 51
| | | | | |
1 DSRALVQSYH DLAEPVAKHV RPDLSALLAC EGGQNKEIGH DMGSESINDT DTQHLPRRLN 60
61 VNEDVDEVER EAKLGEIAGG VLWNGHCGRN LDHEGFVTPA NLDSAVENRN LHSDGLFKSG 120
121 LPEELQSNSL LSGTGKLDDG ASSRRLSLKS VA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
