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View Structure Prediction Details

Protein: gi|42570887
Organism: Arabidopsis thaliana
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42570887.

Description E-value Query
Range
Subject
Range
SCP9_ARATH - Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1
492.0 [0..1] [437..1]

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Predicted Domain #1
Region A:
Residues: [1-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLILKFMLL ILLVSSHHVR SGSIVKFLPG FKGPLPFELE TGYIGIGEEE NVQFFYYFIK  60
   61 SDKNPQEDPL IIWLNGGPGC SCLSGLFFEN GPLALKNKVY NGSVPSLVST TYSWTKTANI 120
  121 IFLDQPVGSG FSYSKTPIER TSDTSEVKKI HEFLQKWLIK HPQFLSNPFY VVGDSYSGMI 180
  181 VPALVHEISK GNYICCNPPI NLQGYVLGNP ITHIEFEQNF RIPYAHGMSL ISDELYESLK 240
  241 RICKGNYFSV DPSNKKCLKL VEEYHKCTDN INSHHTLIAN CDDSNTQHIS PDCYYYPYHL 300
  301 VECWANNESV REALHVDKGS IGEWIRDHRG IPYKSDIRSS IPYHMNNSIN GYRSLIFSGD 360
  361 HDITMPFQAT QAWIKSLNYS IIDDWRPWMI KGQIAGYTRT YSNKMTFATV KASGHTAEYL 420
  421 PEESSIMFQR WISGQPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.39794
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.12335967816646 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.82794853241918 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
binding 0.112743564301567 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.0490144635545247 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle