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View Structure Prediction Details

Protein: SK1_ARATH
Organism: Arabidopsis thaliana
Length: 303 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SK1_ARATH.

Description E-value Query
Range
Subject
Range
gi|111281550, gi... - gi|120611285|ref|YP_970963.1| FtsH peptidase [Acidovorax avenae subsp. citrulli AAC00-1], gi|1205897...
244.0 [0..34] [302..131]

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Predicted Domain #1
Region A:
Residues: [1-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAITQRIQ YPSWVDCRKV ECKPQRGSLR YSQQVKVDRR FRGLSLARLQ PERRNDQRRA  60
   61 VSPAVSCSDN NSSALLETGS VYPFDEDILK RKAEEVKPYL NGRSMYLVGM MGSGKTTVGK 120
  121 LMSKVLGYTF FDCDTLIEQA MNGTSVAEIF VHHGENFFRG KETDALKKLS SRYQVVVSTG 180
  181 GGAVIRPINW KYMHKGISIW LDVPLEALAH RIAAVGTDSR PLLHDESGDA YSVAFKRLSA 240
  241 IWDERGEAYT NANARVSLEN IAAKRGYKNV SDLTPTEIAI EAFEQVLSFL EKEETMEIPD 300
  301 GDL

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Detection Method: PSI-BLAST
Confidence: 53.221849
Match: 2ce7A
Description: EDTA treated
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle