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View Structure Prediction Details

Protein: KEA4_ARATH
Organism: Arabidopsis thaliana
Length: 592 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KEA4_ARATH.

Description E-value Query
Range
Subject
Range
gi|4191789, gi|2... - gi|4191789|gb|AAD10158.1| putative potassium/proton antiporter [Arabidopsis thaliana], pir||G84578 p...
349.0 [0..16] [592..1]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRCKNNTDK FSVITMRLLT LLLICTFFFF FSFAYSAESD NETDSVVTRE INGTVVESNA  60
   61 TSAKPREDSF ADMIDRALEK EFPDNDQNEV PDPGSFNNSV ADQQAVLETV ARVKPKKNET 120
  121 KTKEEKSFFN LDNENGVEDT PRLIDRKDNV FIMSNPKSKY PVL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-592]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLDLRLISDL VVVIVSATCG GIAFACAGQP VITGYLLAGS IIGPGGLSFV SEMVQVETVA  60
   61 QFGVIFLLFA LGLEFSAAKL RVVRAVAIPG GLLQIFLFMC LSGITASLCG GKLTEGIFVG 120
  121 AFLSMSSTAV VLKFLMERNS ISALHGQITV GTLILQDCAV GLLFALLPVL GGTSGVLQGV 180
  181 LSMAKSLAIL IAFLGALFVL SRTWVPWFLK LMTSLSSQTN ELYQLAAVAF CLLVAWCSDK 240
  241 LGLSLELGSF AAGVMISTTD LAQHTLEQVE PIRNFFAALF LASIGMLIHM HFLWNHVDIL 300
  301 LAAVLLVIVI KTVVVAIVVK VFGYNNKTAV LVGMSLAQIG EFAFVLLSRA SNLHLIESKL 360
  361 YLLLLGTTAL SLVTTPLLFK LIPAVVHLGV LLRWFSPDSS TEIGFKGELY HSESAKRISL 420
  421 MIQGSLHDS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 1zcdA
Description: Crystal structure of the Na+/H+ antiporter NhaA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle