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View Structure Prediction Details

Protein: RECA3_ARATH
Organism: Arabidopsis thaliana
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RECA3_ARATH.

Description E-value Query
Range
Subject
Range
gi|25300506 - gi|25300506|pir||G97585 reca protein (recombinase a) [imported] - Agrobacterium tumefaciens (strain ...
gi|15156992, gi|... - gi|15889174|ref|NP_354855.1| recombinase A [Agrobacterium tumefaciens str. C58], gi|15156992|gb|AAK8...
392.0 [0..50] [402..61]

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Predicted Domain #1
Region A:
Residues: [1-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARILRNVYS LRSSLFSSEL LRRSVVGTSF QLRGFAAKAK KKSKSDGNGS SEEGMSKKEI  60
   61 ALQQALDQIT SSFGKGSIMY LGRAVSPRNV PVFSTGSFAL DVALGVGGLP KGRVVEIYGP 120
  121 EASGKTTLAL HVIAEAQKQG GTCVFVDAEH ALDSSLAKAI GVNTENLLLS QPDCGEQALS 180
  181 LVDTLIRSGS VDVIVVDSVA ALVPKGELEG EMGDAHMAMQ ARLMSQALRK LSHSLSLSQT 240
  241 LLIFINQVRS KLSTFGGFGG PTEVTCGGNA LKFYASMRLN IKRIGLIKKG EETTGSQVSV 300
  301 KIVKNKLAPP FRTAQFELEF GKGICKITEI IDLSIKHKFI AKNGTFYNLN GKNYHGKEAL 360
  361 KRFLKQNESD QEELMKKLQD KLIADEAADK ETESESEEED SLRVVVSPDN TDDESPALVV 420
  421 GAAAVVVEAA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 1ubcA
Description: RecA protein, ATPase-domain; RecA protein, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle