YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|62286927, gi\|...
Organism:	Drosophila melanogaster
Length:	108 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62286927, gi|....

Description	E-value	Query Range	Subject Range
gi\|13517219 - gi\|13517219\|gb\|AAK28709.1\| preproinsulin [Catostomus commersoni]	117.0	[0..3]	[107..4]
INS_CYPCA - Insulin OS=Cyprinus carpio GN=ins PE=1 SV=1	117.0	[0..3]	[107..4]
gi\|13991923 - gi\|13991923\|gb\|AAK51558.1\|AF373021_1 preproinsulin [Catla catla]	116.0	[0..3]	[107..4]
INS_LOPPI - (P01341) Insulin precursor INS_LOPAM - Insulin OS=Lophius americanus GN=ins PE=3 SV=1	111.0	[0..2]	[107..4]
INS_ORENI - Insulin OS=Oreochromis niloticus GN=ins PE=1 SV=2	110.0	[0..2]	[107..4]
INS_VERMO - Insulin OS=Verasper moseri GN=ins PE=3 SV=1	108.0	[0..2]	[107..4]
INS_CHICK - Insulin OS=Gallus gallus GN=INS PE=1 SV=1	106.0	[0..2]	[107..3]
gi\|116235019 - gi\|116235019\|dbj\|BAF34949.1\| insulin [Oryzias latipes]	105.0	[0..4]	[106..1]
INS2_XENLA - Insulin-2 OS=Xenopus laevis GN=ins-b PE=1 SV=2	105.0	[0..2]	[107..3]

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Predicted Domain #1

Region A:
Residues: [1-108]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFRSVIPVL LFLIPLLLSA QAANSLRACG PALMDMLRVA CPNGFNSMFA KRGTLGLFDY  60
   61 EDHLADLDSS ESHHMNSLSS IRRDFRGVVD SCCRKSCSFS TLRAYCDS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	14.221849
Match:	3lriA
Description:	Insulin-like growth factor
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits