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View Structure Prediction Details

Protein: WASF4
Organism: Homo sapiens
Length: 625 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WASF4.

Description E-value Query
Range
Subject
Range
gi|113430404 - gi|113430404|ref|XP_001127417.1| PREDICTED: similar to Wiskott-Aldrich syndrome protein family membe...
387.0 [0..121] [625..18]
WASF2_BOVIN - Wiskott-Aldrich syndrome protein family member 2 OS=Bos taurus GN=WASF2 PE=2 SV=1
340.0 [0..129] [625..1]
WASF3_MOUSE - Wiskott-Aldrich syndrome protein family member 3 OS=Mus musculus GN=Wasf3 PE=1 SV=1
339.0 [0..129] [625..1]
gi|109120243, gi... - gi|109120243|ref|XP_001093694.1| PREDICTED: similar to WAS protein family, member 3 isoform 1 [Macac...
338.0 [0..129] [625..1]
gi|114649086, gi... - gi|114649094|ref|XP_001157126.1| PREDICTED: WAS protein family, member 3 isoform 2 [Pan troglodytes]...
338.0 [0..129] [625..1]

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Predicted Domain #1
Region A:
Residues: [1-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRNKMSFSS PGQQVMYPPG YKTQGHGAEP STSPLSSINY IIQSTETRRS LDKLLKGDID  60
   61 IGSQNGTDLF GFGNTHEYPD LQMILSGALW CNIHKVSGKA CLIFPHRGYN SSKLHNRGIC 120
  121 LSLRSRSTVP LVTRNIEPRH LCRQTLPSVR SELECVTNIT LANVIRQLGS LSKYAEDIFG 180
  181 ELFTQANTFA SPVSSLAERV DGLQVKVTQL DPKEEEVSLQ VINTRKAFRS STIQDQKLFD 240
  241 R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [242-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSLPVPVLET YNTCDTPPPL NNLTPYRDDG TEALKFYTDP SYFFDLWKKK MLQDTRDIMK  60
   61 EKRKHRKEKK DNPNRGNVN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [321-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRKIKTRKEE WEKIKMGQEF VESKEKLGPF GYPPTLVYQN GSIGCVENVD ASSYPPPSQS  60
   61 DSASSPSPSF SEDNLPPPPA EFSYP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [406-625]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDNQRGSGLA GPKRSSVVSP SHPPPAPPLG SPPSSKPGFA PPPAPPPPPP PMIGIPPPPP  60
   61 PIGFGSPGTP PPPSSPSFPP HPDFAAPPPL PPPPAADYPT LPPPPLSQPT RGAPPPPPPP 120
  121 PPGPPPPPFT GADGQPAVPP PLSDTTKPKS SLPAISDAHS DLLSAICQGF QLRRVEEQQE 180
  181 QEKWDVVGND VATILSRRIA VEYSDSEDDS SEFDGDDWSN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle