YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|22219317
Organism:	Homo sapiens
Length:	130 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22219317.

Description	E-value	Query Range	Subject Range
gi\|3982895 - gi\|3982895\|gb\|AAC83698.1\| complement factor Bf-2 [Oncorhynchus mykiss]	140.0	[0..2]	[127..70]
gi\|55664236, gi\|... - gi\|55961942\|emb\|CAI16731.1\| complement component (3d/Epstein Barr virus) receptor 2 [Homo sapiens], ...	137.0	[0..1]	[129..524]
gi\|114572321 - gi\|114572321\|ref\|XP_514158.2\| PREDICTED: complement component (3d/Epstein Barr virus) receptor 2 [Pa...	137.0	[0..1]	[129..524]
gi\|73960689 - gi\|73960689\|ref\|XP_547388.2\| PREDICTED: similar to complement component (3d/Epstein Barr virus) rece...	136.0	[0..1]	[129..1121]

Back

Predicted Domain #1

Region A:
Residues: [1-130]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EASCGSPPPI LNGRISYYST PIAVGTVIRY SCSGTFRLIG EKSLLCITKD KVDGTWDKPA  60
   61 PKCEYFNKYS SCPEPIVPGG YKIRGSTPYR HGDSVTFACK TNFSMNGNKS VWCQANNMWG 120
  121 PTRLPTCVSI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.154902
Match:	2gsxA
Description:	No description for 2gsxA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits