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View Structure Prediction Details

Protein: gi|21730374, gi|...
Organism: Homo sapiens
Length: 89 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21730374, gi|....

Description E-value Query
Range		 Subject
Range
ETS1_RAT - Protein C-ets-1 OS=Rattus norvegicus GN=Ets1 PE=1 SV=1
 120.0 [0..3] [77..60]
MYBE_AVILE - p135Gag-Myb-Ets-transforming protein (Fragment) OS=Avian leukemia virus E26 GN=GAG PE=3 SV=1
gi|223807 - gi|223807|prf||0912261A protein p135
gi|809070 - gi|809070|emb|CAA24979.1| p153 protein [Avian leukemia virus]
 120.0 [0..3] [77..285]
gi|211464 - gi|211464|gb|AAA48668.1| c-ets protein
 120.0 [0..3] [77..110]
gi|224012 - gi|224012|prf||1007200C ets gene
 120.0 [0..3] [77..47]
gi|15341828 - gi|15341828|gb|AAH13089.1| Ets1 protein [Mus musculus]
 120.0 [0..3] [77..13]

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Predicted Domain #1
Region A:
Residues: [1-89] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIRLPAHLRL QPIYWSRDDV AQWLKWAENE FSLRPIDSNT FEXNGKALLL LTKEDFRYRS  60
   61 PHSGDELYEL LQHILKQRDH HHHHHHRHD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.09691
Match: 1lkyB
Description: Etv6 transcription factor pointed domain (Tel SAM)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.633600780660145 bayes_pls_golite062009
protein binding 0.29861856894481 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle