YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|5822131, gi\|1...
Organism:	Homo sapiens
Length:	144 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5822131, gi|1....

Description	E-value	Query Range	Subject Range
gi\|109132712 - gi\|109132712\|ref\|XP_001084096.1\| PREDICTED: dual specificity phosphatase 9 [Macaca mulatta]	166.0	[0..1]	[144..201]
gi\|114690595 - gi\|114690595\|ref\|XP_001142865.1\| PREDICTED: hypothetical protein [Pan troglodytes]	166.0	[0..1]	[144..783]
DUSP9 - dual specificity phosphatase 9	165.0	[0..1]	[144..201]
gi\|149029928, gi... - gi\|83816929\|ref\|NP_001033062.1\| dual specificity phosphatase 9 [Rattus norvegicus], gi\|82414778\|gb\|A...	165.0	[0..2]	[144..232]
gi\|32402376, gi\|... - gi\|71680647\|gb\|AAI00310.1\| Dual specificity phosphatase 9 [Mus musculus], gi\|32567765\|ref\|NP_083628....	164.0	[0..2]	[144..270]
gi\|76658903 - gi\|76658903\|ref\|XP_870848.1\| PREDICTED: similar to Dual specificity protein phosphatase 9 (Mitogen-a...	163.0	[0..2]	[144..377]
gi\|47229874 - gi\|47229874\|emb\|CAG07070.1\| unnamed protein product [Tetraodon nigroviridis]	162.0	[0..2]	[144..237]

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Predicted Domain #1

Region A:
Residues: [1-144]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASFPVEILPF LYLGCAKDST NLDVLEEFGI KYILNVTPNL PNLFENAGEF KYKQIPISDH  60
   61 WSQNLSQFFP EAISFIDEAR GKNCGVLVHS LAGISRSVTV TVAYLMQKLN LSMNDAYDIV 120
  121 KMKKSNISPN FNFMGQLLDF ERTL

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Detection Method:	PSI-BLAST
Confidence:	38.522879
Match:	1mkpA
Description:	CRYSTAL STRUCTURE OF PYST1 (MKP3)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.532771614927042	bayes_pls_golite062009
hydrolase activity	0.40946506358565	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.38379754974017	bayes_pls_golite062009
phosphoric ester hydrolase activity	0.379743522718551	bayes_pls_golite062009
phosphatase activity	0.37915439306018	bayes_pls_golite062009
phosphoprotein phosphatase activity	0.0905316221038603	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: