YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|9257074, gi\|9...
Organism:	Homo sapiens
Length:	125 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9257074, gi|9....

Description	E-value	Query Range	Subject Range
gi\|73968408 - gi\|73968408\|ref\|XP_848910.1\| PREDICTED: similar to unactive progesterone receptor, 23 kD [Canis fami...	165.0	[0..1]	[125..341]
gi\|50804055 - gi\|50804055\|ref\|XP_424297.1\| PREDICTED: similar to Hypothetical protein KIAA0286 (HA6800), partial [...	159.0	[0..2]	[125..1722]
gi\|51493666 - gi\|51493666\|gb\|AAU04847.1\| cytosolic prostaglandin E synthase [Bos taurus]	141.0	[0..1]	[125..1]
TEBP_MACFA - Prostaglandin E synthase 3 OS=Macaca fascicularis GN=PTGES3 PE=1 SV=1 gi\|109097318 - gi\|109097318\|ref\|XP_001115388.1\| PREDICTED: similar to unactive progesterone receptor, 23 kD isoform... gi\|194037556 - gi\|194037556\|ref\|XP_001929448.1\| PREDICTED: similar to unactive progesterone receptor, 23 kD [Sus sc... gi\|208967152, gi... - gi\|208967152\|dbj\|BAG73590.1\| prostaglandin E synthase 3 [synthetic construct], gi\|157929124\|gb\|ABW03... TEBP_PONPY - Prostaglandin E synthase 3 - Pongo pygmaeus (Orangutan) ENSOCUP000000160... - pep:novel chromosome:oryCun2:17:42155977:42156459:1 gene:ENSOCUG00000022154 transcript:ENSOCUT000000... TEBP_BOVIN - Prostaglandin E synthase 3 OS=Bos taurus GN=PTGES3 PE=1 SV=1 TEBP_PONAB - Prostaglandin E synthase 3 OS=Pongo abelii GN=PTGES3 PE=2 SV=1 PTGES3 - prostaglandin E synthase 3 (cytosolic) ENSPTRT00000009388 - null	141.0	[0..1]	[125..1]
TEBP_MOUSE - Prostaglandin E synthase 3 OS=Mus musculus GN=Ptges3 PE=1 SV=1 TEBP_RAT - Prostaglandin E synthase 3 OS=Rattus norvegicus GN=Ptges3 PE=1 SV=2	141.0	[0..1]	[125..1]
gi\|47229310 - gi\|47229310\|emb\|CAG04062.1\| unnamed protein product [Tetraodon nigroviridis]	140.0	[0..2]	[125..1]
gi\|114590198, gi... - gi\|114590200\|ref\|XP_001159134.1\| PREDICTED: similar to p23 isoform 2 [Pan troglodytes], gi\|114590198...	139.0	[0..1]	[125..1]

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Predicted Domain #1

Region A:
Residues: [1-125]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPASAKWYD RRDYVFIEFC VEDSKDVNVN FEKSKLTFSC LGGSDNFKHL NEIDLFHCID  60
   61 PNDSKHKRTD RSILCCLRKG ESGQSWPRLT KERAKLNWLS VDFNNWKDWE DDSDEDMSNF 120
  121 DRFSE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.221849
Match:	1ejfA
Description:	Co-chaperone p23
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits