YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|15826202
Organism:	Escherichia coli
Length:	159 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15826202.

Description	E-value	Query Range	Subject Range
gi\|12620102 - gi\|12620102\|gb\|AAG60561.1\|AF250769_2 unknown [uncultured bacterium pCosHE1]	196.0	[0..3]	[159..2]
gi\|12407612 - gi\|12407612\|gb\|AAG53587.1\|AF248314_2 unknown [uncultured bacterium pCosAS1]	194.0	[0..3]	[159..2]
gi\|82776157, gi\|... - gi\|82776157\|ref\|YP_402504.1\| putative kinase inhibitor protein [Shigella dysenteriae Sd197], gi\|8124...	193.0	[0..3]	[159..2]
gi\|85721638, gi\|... - gi\|85858547\|ref\|YP_460749.1\| phosphatidylethanolamine-binding protein [Syntrophus aciditrophicus SB]...	191.0	[0..3]	[158..35]
gi\|25302206, gi\|... - pir\|\|D85585 hypothetical protein ybhB [imported] - Escherichia coli (strain O157:H7, substrain EDL9... gi\|188015483, gi... - gi\|188015483\|gb\|EDU53605.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 str. ... gi\|13360310, gi\|... - gi\|15830105\|ref\|NP_308878.1\| hypothetical protein ECs0851 [Escherichia coli O157:H7], gi\|13360310\|db... gi\|30062258, gi\|... - gi\|30062258\|ref\|NP_836429.1\| putative kinase inhibitor protein [Shigella flexneri 2a str. 2457T], gi... gi\|15800524, gi\|... - gi\|15800524\|ref\|NP_286536.1\| putative kinase inhibitor protein [Escherichia coli O157:H7 EDL933], gi... gi\|56383274, gi\|... - gi\|56479723\|ref\|NP_706651.2\| putative kinase inhibitor protein [Shigella flexneri 2a str. 301], gi\|5... gi\|110614322, gi... - gi\|110804774\|ref\|YP_688294.1\| putative kinase inhibitor protein [Shigella flexneri 5 str. 8401], gi\|... gi\|208738263, gi... - gi\|208822778\|ref\|ZP_03263097.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 s... gi\|208815998, gi... - gi\|208815998\|ref\|ZP_03257177.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 s... gi\|208809096, gi... - gi\|208809096\|ref\|ZP_03251433.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 s... gi\|195936811 - gi\|195936811\|ref\|ZP_03082193.1\| putative kinase inhibitor protein [Escherichia coli O157:H7 str. EC4... gi\|218357205, gi... - gi\|218549664\|ref\|YP_002383455.1\| putative kinase inhibitor protein [Escherichia fergusonii ATCC 3546... gi\|217324297, gi... - gi\|217324297\|ref\|ZP_03440381.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 s... gi\|13360310, gi\|... - gi\|15830105\|ref\|NP_308878.1\| putative kinase inhibitor protein [Escherichia coli O157:H7 str. Sakai]... gi\|209158670, gi... - gi\|209397270\|ref\|YP_002269442.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 ... gi\|168776429, gi... - gi\|187768158\|gb\|EDU32002.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 str. ... gi\|168767271, gi... - gi\|189363383\|gb\|EDU81802.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 str. ... gi\|168763415, gi... - gi\|189366477\|gb\|EDU84893.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 str. ... gi\|189355849, gi... - gi\|189355849\|gb\|EDU74268.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 str. ... gi\|194416777, gi... - gi\|194434995\|ref\|ZP_03067237.1\| phosphatidylethanolamine-binding protein [Shigella dysenteriae 1012]... gi\|189376936, gi... - gi\|189376936\|gb\|EDU95352.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 str. ... gi\|254591367, gi... - gi\|254791967\|ref\|YP_003076804.1\| predicted kinase inhibitor [Escherichia coli O157:H7 str. TW14359],... gi\|168786984, gi... - gi\|189373000\|gb\|EDU91416.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 str. ... gi\|189003113, gi... - gi\|189003113\|gb\|EDU72099.1\| phosphatidylethanolamine-binding protein [Escherichia coli O157:H7 str. ...	191.0	[0..3]	[159..2]
gi\|77979893, gi\|... - gi\|77979893\|ref\|ZP_00835309.1\| COG1881: Phospholipid-binding protein [Yersinia intermedia ATCC 29909...	191.0	[0..4]	[159..24]
gi\|260843015\|ref... - putative kinase inhibitor [Escherichia coli O103:H2 str. 12009] gi\|75255324, gi\|... - gi\|75255324\|ref\|ZP_00727153.1\| COG1881: Phospholipid-binding protein [Escherichia coli E22], gi\|1930... gi\|75208773, gi\|... - gi\|75208773\|ref\|ZP_00709062.1\| COG1881: Phospholipid-binding protein [Escherichia coli B171], gi\|194... gi\|164457635 - gi\|164457635\|dbj\|BAF96542.1\| predicted kinase inhibitor [Escherichia coli O103:H2] gi\|195182793 - gi\|195182793\|dbj\|BAG66373.1\| predicted protein [Escherichia coli O111:H-] gi\|33323008 - gi\|33323008\|gb\|AAQ07242.1\|AF497476_3 YbhB [Escherichia coli]	191.0	[0..3]	[159..2]
gi\|455168 - gi\|455168\|gb\|AAA23513.1\| ORF 1 [Escherichia coli]	191.0	[0..3]	[159..2]
gi\|260854064\|ref... - putative kinase inhibitor [Escherichia coli O26:H11 str. 11368] gi\|253972751, gi... - gi\|254160850\|ref\|YP_003043958.1\| predicted kinase inhibitor [Escherichia coli B str. REL606], gi\|253... gi\|254287664, gi... - gi\|254287664\|ref\|YP_003053412.1\| predicted kinase inhibitor [Escherichia coli BL21(DE3)], gi\|2539769... gi\|251784292, gi... - gi\|251784292\|ref\|YP_002998596.1\| hypothetical protein B21_00757 [Escherichia coli BL21], gi\|24237656... gi\|238862607, gi... - gi\|238900031\|ref\|YP_002925827.1\| putative kinase inhibitor [Escherichia coli BW2952], gi\|238862607\|g... gi\|194439744, gi... - gi\|83584843\|ref\|ZP_00923502.1\| COG1881: Phospholipid-binding protein [Escherichia coli 101-1], gi\|19... YBHB_ECOLI - UPF0098 protein ybhB - Escherichia coli gi\|74311317, gi\|... - gi\|74311317\|ref\|YP_309736.1\| putative kinase inhibitor protein [Shigella sonnei Ss046], gi\|73854794\|... gi\|89107624, gi\|... - gi\|89107624\|ref\|AP_001404.1\| predicted kinase inhibitor [Escherichia coli str. K-12 substr. W3110], ... EG11238 - kinase inhibitor homolog, UPF0098 family / Raf kinase inhibitor RKIP homolog, function unknown; UPF0... gi\|169755799, gi... - gi\|170020871\|ref\|YP_001725825.1\| putative kinase inhibitor protein [Escherichia coli ATCC 8739], gi\|... gi\|260866940\|ref... - putative kinase inhibitor [Escherichia coli O111:H- str. 11128] gi\|75189814, gi\|... - gi\|75189814\|ref\|ZP_00703081.1\| COG1881: Phospholipid-binding protein [Escherichia coli E24377A], gi\|... gi\|169888267, gi... - gi\|170080432\|ref\|YP_001729752.1\| kinase inhibitor [Escherichia coli str. K-12 substr. DH10B], gi\|169... gi\|209918017, gi... - gi\|209918017\|ref\|YP_002292101.1\| putative kinase inhibitor protein [Escherichia coli SE11], gi\|20991... gi\|218553356, gi... - gi\|218553356\|ref\|YP_002386269.1\| putative kinase inhibitor protein [Escherichia coli IAI1], gi\|21836... gi\|75235851, gi\|... - gi\|75235851\|ref\|ZP_00720006.1\| COG1881: Phospholipid-binding protein [Escherichia coli E110019], gi\|... gi\|218694246, gi... - gi\|218694246\|ref\|YP_002401913.1\| putative kinase inhibitor protein [Escherichia coli 55989], gi\|2183... gi\|188494855, gi... - gi\|75511376\|ref\|ZP_00734061.1\| COG1881: Phospholipid-binding protein [Escherichia coli 53638], gi\|18... gi\|164457617 - gi\|164457617\|dbj\|BAF96526.1\| predicted kinase inhibitor [Escherichia coli O26:H11] gi\|157160248, gi... - gi\|75194925\|ref\|ZP_00704995.1\| COG1881: Phospholipid-binding protein [Escherichia coli HS], gi\|15716... gi\|164457626 - gi\|164457626\|dbj\|BAF96534.1\| predicted kinase inhibitor [Escherichia coli O111:H-] EG11238 - kinase inhibitor homolog, UPF0098 family / Raf kinase inhibitor RKIP homolog, function unknown; UPF0... gi\|191168434, gi... - gi\|75228361\|ref\|ZP_00715009.1\| COG1881: Phospholipid-binding protein [Escherichia coli B7A], gi\|1911...	191.0	[0..3]	[159..2]
gi\|238913352 - gi\|238913352\|ref\|ZP_04657189.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enteri... gi\|16759717 - gi\|16759717\|ref\|NP_455334.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enterica ... gi\|168230676, gi... - gi\|205334900\|gb\|EDZ21664.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|167550534, gi... - gi\|205324629\|gb\|EDZ12468.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|213021862 - gi\|213021862\|ref\|ZP_03336309.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enteri... gi\|206708033, gi... - gi\|207856230\|ref\|YP_002242881.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enter... gi\|205271832, gi... - gi\|205352051\|ref\|YP_002225852.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enter... gi\|204929862, gi... - gi\|204929862\|ref\|ZP_03220883.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica ... gi\|213647613 - gi\|213647613\|ref\|ZP_03377666.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enteri... gi\|213424810 - gi\|213424810\|ref\|ZP_03357560.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enteri... gi\|213421077 - gi\|213421077\|ref\|ZP_03354143.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enteri... gi\|213052120 - gi\|213052120\|ref\|ZP_03344998.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enteri... gi\|194409143, gi... - gi\|194450839\|ref\|YP_002044820.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enter... gi\|194442547, gi... - gi\|194442547\|ref\|YP_002040028.1\| hypothetical protein SNSL254_A0856 [Salmonella enterica subsp. ente... gi\|205343270, gi... - gi\|205343270\|gb\|EDZ30034.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|205340229, gi... - gi\|205340229\|gb\|EDZ26993.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica sero... gi\|16502010, gi\|... - gi\|25302213\|pir\|\|AF0596 conserved hypothetical protein STY0825 [imported] - Salmonella enterica subs... gi\|198245616, gi... - gi\|198245616\|ref\|YP_002214757.1\| hypothetical protein SeD_A0887 [Salmonella enterica subsp. enterica... gi\|29138141, gi\|... - gi\|29142510\|ref\|NP_805852.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enterica ... gi\|197262454, gi... - gi\|197262454\|ref\|ZP_03162528.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica ... gi\|197214907, gi... - gi\|197251204\|ref\|YP_002145748.1\| hypothetical protein SeAg_B0828 [Salmonella enterica subsp. enteric... gi\|194469377, gi... - gi\|194469377\|ref\|ZP_03075361.1\| conserved hypothetical protein [Salmonella enterica subsp. enterica ... gi\|224467132, gi... - gi\|224582605\|ref\|YP_002636403.1\| hypothetical protein SPC_0788 [Salmonella enterica subsp. enterica ... gi\|214000508 - gi\|214000508\|ref\|ZP_03411243.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enteri... gi\|213976591 - gi\|213976591\|ref\|ZP_03403850.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enteri... gi\|213857244 - gi\|213857244\|ref\|ZP_03384215.1\| putative kinase inhibitor protein [Salmonella enterica subsp. enteri...	191.0	[0..3]	[159..2]

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Predicted Domain #1

Region A:
Residues: [1-159]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AXKLISNDLR DGDKLPHRHV FNGXGYDGDN ISPHLAWDDV PAGTKSFVVT CYDPDAPTGS  60
   61 GWWHWVVVNL PADTRVLPQG FGSGLVAXPD GVLQTRTDFG KTGYDGAAPP KGETHRYIFT 120
  121 VHALDIERID VDEGASGAXV GFNVHFHSLA SASITAXFS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	49.69897
Match:	1fjjA
Description:	Hypothetical protein YbhB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.0348943211245614	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: