YRC Public Data Repository - Protein Structure Prediction

Protein:	MFA1_SACUV
Organism:	Saccharomyces uvarum
Length:	144 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MFA1_SACUV.

Description	E-value	Query Range	Subject Range
MFAL1_YEAST - Mating factor alpha-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MF(ALPHA)1 PE=1 SV... MF(ALPHA)1 - Mating pheromone alpha-factor, made by alpha cells; interacts with mating type a cells to induce cel...	241.0	[0..1]	[144..1]
gi\|27948829 - gi\|27948829\|gb\|AAO25615.1\| mating pheromone alpha2 [Kluyveromyces delphensis]	208.0	[0..1]	[144..1]
gi\|24940430 - gi\|24940430\|emb\|CAD56314.1\| alpha-pheromone [Saccharomyces paradoxus]	203.0	[0..1]	[144..1]
gi\|50288999, gi\|... - gi\|50288999\|ref\|XP_446929.1\| unnamed protein product [Candida glabrata], gi\|49526238\|emb\|CAG59862.1\|... gi\|49526238, gi\|... - gi\|49526238\|emb\|CAG59862.1\| unnamed protein product [Candida glabrata], gi\|27948823\|gb\|AAO25610.1\| m...	182.0	[0..1]	[144..1]

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Predicted Domain #1

Region A:
Residues: [1-144]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFPSIFTAV LFAASSALAA PVNTTTEDET AQIPAEAVIG YLDLEGDFDV AVLPFSNSTN  60
   61 NGLLFINTTI ASIAAKEEGV SLDKREAEAW HWLQLKPGQP MYKREADAEA WHWLQLKPGQ 120
  121 PMYKREADAE AWHWLQLKPG QPMY

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	61.39794
Match:	PF05436.2
Description:	No description for PF05436.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits