YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|225698070, gi...
Organism:	Homo sapiens
Length:	114 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|225698070, gi....

Description	E-value	Query Range	Subject Range
gi\|73971741 - gi\|73971741\|ref\|XP_854585.1\| PREDICTED: similar to BAG-family molecular chaperone regulator-1 (BCL-2...	186.0	[0..2]	[114..248]
gi\|76646314 - gi\|76646314\|ref\|XP_583203.2\| PREDICTED: similar to BCL2-associated athanogene isoform 1L [Bos taurus...	186.0	[0..2]	[114..264]
gi\|109111198 - gi\|109111198\|ref\|XP_001090384.1\| PREDICTED: similar to BCL2-associated athanogene isoform 1L [Macaca...	181.0	[0..2]	[114..293]
gi\|114624364 - gi\|114624364\|ref\|XP_520528.2\| PREDICTED: similar to BAG1 protein [Pan troglodytes]	174.0	[0..2]	[114..230]
gi\|110611791 - gi\|110611791\|gb\|AAH02407.1\| Unknown (protein for IMAGE:2961537) [Homo sapiens]	173.0	[0..2]	[114..235]

Back

Predicted Domain #1

Region A:
Residues: [1-114]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNSPQEEVEL KKLKHLEKSV EKIADQLEEL NKELTGIQQG FLPKDLQAEA LCKLDRRVKA  60
   61 TIEQFMKILE EIDTLILPEN FKDSRLKRKG LVKKVQAFLA ECDTVEQNIC QETE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	38.045757
Match:	1hx1B
Description:	BAG-family molecular chaperon regulator-1, BAG1
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits