| Protein: | gi|7766869 |
| Organism: | Homo sapiens |
| Length: | 229 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7766869.
| Description | E-value | Query Range |
Subject Range |
|
|
217.0 | [0..9] | [228..61] |
|
|
217.0 | [0..9] | [228..61] |
|
|
217.0 | [0..9] | [228..4] |
|
|
214.0 | [0..12] | [225..64] |
|
|
212.0 | [0..9] | [228..61] |
|
|
211.0 | [0..9] | [228..61] |
|
Region A: Residues: [1-229] |
1 11 21 31 41 51
| | | | | |
1 GSDNESDEEV AGKKSFSAQE REYIRQGKEA TAVVDQILAQ EENWKFEKNN EYGDTVYTIE 60
61 VPFHGKTFIL KTFLPCPAEL VYQEVILQPE RXVLWNKTVT ACQILQRVED NTLISYDVSA 120
121 GAAGGVVSPR DFVNVRRIER RRDRYLSSGI ATSHSAKPPT HKYVRGENGP GGXIVLKSAS 180
181 NPRVCTFVWI LNTDLKGRLP RYLIHQSLAA TXFEFAFHLR QRISELGAR
|
| Detection Method: |  |
| Confidence: | 48.09691 |
| Match: | 1em2A |
| Description: | Lipid transport domain of Mln64 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.60389066490451 | bayes_pls_golite062009 |
| protein binding | 1.48975086203348 | bayes_pls_golite062009 |
| sterol binding | 0.63856471069172 | bayes_pls_golite062009 |
| SH2 domain binding | 0.434779463822261 | bayes_pls_golite062009 |
| cholesterol binding | 0.432520187215906 | bayes_pls_golite062009 |
| phospholipid transporter activity | 0.328500953276889 | bayes_pls_golite062009 |
| lipid binding | 0.207466011012419 | bayes_pls_golite062009 |
| lipid transporter activity | 0.166184613717813 | bayes_pls_golite062009 |
| steroid binding | 0.109277325408336 | bayes_pls_golite062009 |
| catalytic activity | 0.0116392906163881 | bayes_pls_golite062009 |
