YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|10835852, gi\|...
Organism:	Homo sapiens
Length:	94 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10835852, gi|....

Description	E-value	Query Range	Subject Range
gi\|46127511, gi\|... - gi\|46127511\|ref\|XP_388309.1\| hypothetical protein FG08133.1 [Gibberella zeae PH-1], gi\|42549089\|gb\|E...	181.0	[0..1]	[94..1878]
gi\|157108501, gi... - gi\|157108501\|ref\|XP_001650255.1\| fkbp-rapamycin associated protein [Aedes aegypti], gi\|108884015\|gb\|...	178.0	[0..1]	[94..1917]
gi\|116010468 - gi\|116010468\|emb\|CAJ44735.1\| TOR kinase [Gibberella fujikuroi]	178.0	[0..1]	[94..1880]
gi\|49641284 - gi\|49641284\|emb\|CAH02545.1\| KLLA0B13948p [Kluyveromyces lactis] gi\|50304405, gi\|... - gi\|50304405\|ref\|XP_452152.1\| unnamed protein product [Kluyveromyces lactis], gi\|49641284\|emb\|CAH0254...	178.0	[0..1]	[94..1936]
gi\|55959606, gi\|... - gi\|56204106\|emb\|CAI22101.1\| FK506 binding protein 12-rapamycin associated protein 1 [Homo sapiens], ...	178.0	[0..1]	[94..224]
gi\|68365576 - gi\|68365576\|ref\|XP_693307.1\| PREDICTED: similar to FKBP12-rapamycin complex-associated protein (FK50...	178.0	[0..1]	[94..194]
gi\|73950926 - gi\|73950926\|ref\|XP_535407.2\| PREDICTED: similar to FKBP12-rapamycin complex-associated protein (FK50...	177.0	[0..1]	[94..2020]

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Predicted Domain #1

Region A:
Residues: [1-94]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAILWHEMWH EGLEEASRLY FGERNVKGMF EVLEPLHAMM ERGPQTLKET SFNQAYGRDL  60
   61 MEAQEWCRKY MKSGNVKDLT QAWDLYYHVF RRIS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.69897
Match:	1fapB
Description:	FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.263954840159461	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: