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View Structure Prediction Details

Protein: gi|9955262, gi|9...
Organism: Escherichia coli
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9955262, gi|9....

Description E-value Query
Range
Subject
Range
gi|222708749, gi... - gi|222708749|gb|ACM67176.1| intimin [Escherichia albertii], gi|100173077|gb|ABF69122.1| nu intimin [...
297.0 [0..1] [282..658]
gi|47232495 - gi|47232495|emb|CAG29172.1| intimin nu [Escherichia coli]
296.0 [0..1] [282..658]
gi|145854, gi|21... - gi|2865299|gb|AAC38392.1| intimin [Escherichia coli], pir||I41197 eae protein (enteropathogenic) - E...
EAE_ECO27 - Intimin OS=Escherichia coli O127:H6 GN=eae PE=1 SV=1
292.0 [0..1] [282..658]
gi|52854796 - gi|52854796|gb|AAU88272.1| intimin [Shigella boydii]
289.0 [0..1] [282..658]
EAE_CITFR - Intimin OS=Citrobacter freundii GN=eae PE=3 SV=1
287.0 [0..1] [282..655]

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Predicted Domain #1
Region A:
Residues: [1-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASITEIKADK TTAVANGQDA ITYTVKVMKG DKPVSNQEVT FTTTLGKLSN STEKTDTNGY  60
   61 AKVTLTSTTP GKSLVSARVS DVAVDVKAPE VEFFTTLTID DGNIEIVGTG VKGKLPTVWL 120
  121 QYGQVNLKAS GGNGKYTWRS ANPAIASVDA SSGQVTLKEK GTTTISVISS DNQTATYTIA 180
  181 TPNSLIVPNM SKRVTYNDAV NTCKNFGGKL PSSQNELENV FKAWGAANKY EYYKSSQTII 240
  241 SWVQQTAQDA KSGVASTYDL VKQNPLNNIK ASESNAYATC VK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.30103
Match: 1f00I
Description: Intimin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle