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View Structure Prediction Details

Protein: gi|6137384, gi|6...
Organism: Homo sapiens
Length: 227 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6137384, gi|6....

Description E-value Query
Range		 Subject
Range
EPHA3_CHICK - Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3 PE=1 SV=1
 174.0 [0..8] [224..312]
gi|76619996 - gi|76619996|ref|XP_618422.2| PREDICTED: similar to ephrin receptor EphA5 isoform a, partial [Bos tau...
 172.0 [0..1] [223..263]
gi|109074689 - gi|109074689|ref|XP_001109567.1| PREDICTED: similar to ephrin receptor EphA5 isoform b isoform 3 [Ma...
 172.0 [0..1] [224..345]
gi|114594561 - gi|114594561|ref|XP_517270.2| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes]
 171.0 [0..1] [223..276]

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Predicted Domain #1
Region A:
Residues: [1-227] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REFPPPNPDP KFESKAALLA ARGPEELLCF TERLEDLVCF WEEAASAGVG PGQYSFSYQL  60
   61 EDEPWKLCRL HQAPTARGAV RFWCSLPTAD TSSFVPLELR VTAASGAPRY HRVIHINEVV 120
  121 LLDAPVGLVA RLADESGHVV LRWLPPPETP MTSHIRYEVD VSAGQGAGSV QRVEILEGRT 180
  181 ECVLSNLRGR TRYTFAVRAR MAEPSFGGFW SEWSEPVSLL TPSDLDP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.69897
Match: 1eerB
Description: Erythropoietin (EPO) receptor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.431491932986215 bayes_pls_golite062009
protein binding 0.3642499004435 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle