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View Structure Prediction Details

Protein: gi|83405567, gi|...
Organism: Homo sapiens
Length: 784 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|83405567, gi|....

Description E-value Query
Range
Subject
Range
gi|115936033 - gi|115936033|ref|XP_001186448.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
573.0 [0..117] [783..244]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGDGGTPWA LALLRTFDAG EFTGWEKVGS GGFGQVYKVR HVHWKTWLAI KCSPSLHVDD  60
   61 RERMELLEEA KKMEMAKFRY ILPVYGICRE PVGLVMEYME TGSLEKLLAS EPLPWDLRFR 120
  121 IIHETAVGMN FLHCMAPPLL HLDLKPANIL LDAHYHVKIS DFGLAKCNGL SHSHDLSMDG 180
  181 LFGTIAYLPP ERIREKSRLF DTKHDVYSFA IVIWGVLTQK KPFADEKNIL HIMVKVVKGH 240
  241 RPELPPVCRA RPRACSHLIR LMQRCWQGDP RVRPTFQEIT SETEDLCEKP DDEVKETAHD 300
  301 LDVKSPPEPR SEVVPARLKR ASAPTFDNDY SL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.522879
Match: 2evaA
Description: No description for 2evaA was found.

Predicted Domain #2
Region A:
Residues: [333-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SELLSQLDSG VSQAVEGPEE LSRSSSESKL PSSGSGKRLS GVSSVDSAFS SRGSLSLSFE  60
   61 REPSTSDLGT TDVQKKKLVD AIVSGDTSKL MKILQPQDVD LALDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [438-784]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GASLLHLAVE AGQEECAKWL LLNNANPNLS NRRGSTPLHM AVERRVRGVV ELLLARKISV  60
   61 NAKDEDQWTA LHFAAQNGDE SSTRLLLEKN ASVNEVDFEG RTPMHVACQH GQENIVRILL 120
  121 RRGVDVSLQG KDAWLPLHYA AWQGHLPIVK LLAKQPGVSV NAQTLDGRTP LHLAAQRGHY 180
  181 RVARILIDLC SDVNVCSLLA QTPLHVAAET GHTSTARLLL HRGAGKEAVT SDGYTALHLA 240
  241 ARNGHLATVK LLVEEKADVL ARGPLNQTAL HLAAAHGHSE VVEELVSADV IDLFDEQGLS 300
  301 ALHLAAQGRH AQTVETLLRH GAHINLQSLK FQGGHGPAAT LLRRSKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle