YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|157837160, gi...
Organism:	Aspergillus oryzae
Length:	478 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|157837160, gi....

Description	E-value	Query Range	Subject Range
gi\|230754, gi\|15... - pir\|\|JK0201 alpha-amylase (EC 3.2.1.1) - Aspergillus oryzae, gi\|230754\|pdb\|2TAA\|A Chain A, Structur...	392.0	[0..1]	[478..1]
gi\|38175085 - gi\|38175085\|dbj\|BAD01051.1\| alpha-amylase [Aspergillus kawachii] gi\|134075230, gi... - gi\|134080476\|emb\|CAK46324.1\| extracellular alpha-amylase amyA/amyB-Aspergillus niger, gi\|134075230\|e... gi\|145247000, gi... - gi\|145247000\|ref\|XP_001395749.1\| extracellular alpha-amylase amyA/amyB-Aspergillus niger, gi\|1452362...	389.0	[0..5]	[478..25]
gi\|40313276 - gi\|40313276\|dbj\|BAD06002.1\| alpha-amylase [Aspergillus awamori]	388.0	[0..5]	[478..26]
AMY_ASPSH - Alpha-amylase OS=Aspergillus shirousami GN=amy PE=1 SV=1 gi\|83685 - gi\|83685\|pir\|\|JS0663 alpha-amylase (EC 3.2.1.1) precursor - Aspergillus sp	388.0	[0..5]	[478..26]
gi\|6561863 - gi\|6561863\|gb\|AAF17100.1\|AF208224_1 alpha-amylase [Emericella nidulans] gi\|49092156, gi\|... - gi\|67525889\|ref\|XP_661006.1\| hypothetical protein AN3402.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	387.0	[0..2]	[478..21]
gi\|159125270 - gi\|159125270\|gb\|EDP50387.1\| alpha-amylase, putative [Aspergillus fumigatus A1163] gi\|66849447, gi\|... - gi\|70993932\|ref\|XP_751813.1\| alpha-amylase [Aspergillus fumigatus Af293], gi\|66849447\|gb\|EAL89775.1\|...	386.0	[0..1]	[476..20]

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Predicted Domain #1

Region A:
Residues: [1-478]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATPADWRSQS IYFLLTDRFA RTDGSTTATC NTADQKYCGG TWQGIIDKLD YIQGMGFTAI  60
   61 WITPVTAQLP QTTAYGDAYH GYWQQDIYSL NENYGTADDL KALSSALHER GMYLMVDVVA 120
  121 NHMGYDGAGS SVDYSVFKPF SSQDYFHPFC FIQNYEDQTQ VEDCWLGDNT VSLPDLDTTK 180
  181 DVVKNEWYDW VGSLVSNYSI DGLRIDTVKH VQKDFWPGYN KAAGVYCIGE VLDGDPAYTC 240
  241 PYQNVMDGVL NYPIYYPLLN AFKSTSGSMD DLYNMINTVK SDCPDSTLLG TFVENHDNPR 300
  301 FASYTNDIAL AKNVAAFIIL NDGIPIIYAG QEQHYAGGND PANREATWLS GYPTDSELYK 360
  361 LIASANAIRN YAISKDTGFV TYKNWPIYKD DTTIAMRKGT DGSQIVTILS NKGASGDSYT 420
  421 LSLSGAGYTA GQQLTEVIGC TTVTVGSDGN VPVPMAGGLP RVLYPTEKLA GSKICSSS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	112.0
Match:	2guyA
Description:	No description for 2guyA was found.

Predicted functions:

Term	Confidence	Notes
hydrolase activity, hydrolyzing O-glycosyl compounds	4.55801959095491	bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds	4.29108420555514	bayes_pls_golite062009
hydrolase activity	2.98140830993539	bayes_pls_golite062009
alpha-amylase activity	2.09193270404736	bayes_pls_golite062009
amylase activity	2.03484942782894	bayes_pls_golite062009
chitinase activity	1.947859226275	bayes_pls_golite062009
glucosidase activity	1.92306554001182	bayes_pls_golite062009
catalytic activity	1.85569074294201	bayes_pls_golite062009
hexosaminidase activity	0.763360027922833	bayes_pls_golite062009
binding	0.63693798355947	bayes_pls_golite062009
alpha-glucosidase activity	0.502835520523619	bayes_pls_golite062009
carbohydrate binding	0.28185708488534	bayes_pls_golite062009
transferase activity, transferring hexosyl groups	0.266938437560648	bayes_pls_golite062009
beta-N-acetylhexosaminidase activity	0.263065978664289	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: