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View Structure Prediction Details

Protein: gi|3212622, gi|1...
Organism: Homo sapiens
Length: 137 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3212622, gi|1....

Description E-value Query
Range
Subject
Range
gi|47226732 - gi|47226732|emb|CAG07891.1| unnamed protein product [Tetraodon nigroviridis]
152.0 [0..5] [137..2348]
gi|4878035, gi|4... - gi|4878035|gb|AAD24546.2| neurocan core protein precursor [Gallus gallus], gi|45382043|ref|NP_990071...
151.0 [0..6] [137..1056]
CLC4M_PANTR - C-type lectin domain family 4 member M OS=Pan troglodytes GN=CLEC4M PE=2 SV=1
151.0 [0..2] [137..310]
CLC4M_SYMSY - C-type lectin domain family 4 member M OS=Symphalangus syndactylus GN=CLEC4M PE=3 SV=1
150.0 [0..2] [136..287]
gi|109082372 - gi|109082372|ref|XP_001091462.1| PREDICTED: aggrecan 1 [Macaca mulatta]
149.0 [0..5] [137..1333]
ACAN - aggrecan
149.0 [0..5] [137..2204]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALQTVCLKGT KVHMKCFLAF TQTKTFHEAS EDCISRGGTL STPQTGSEND ALYEYLRQSV  60
   61 GNEAEIWLGL NDMAAEGTWV DMTGARIAYK NWETEITAQP DGGKTENCAV LSGAANGKWF 120
  121 DKRCRDQLPY ICQFGIV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.154902
Match: 1htnA
Description: HUMAN TETRANECTIN, A TRIMERIC PLASMINOGEN BINDING PROTEIN WITH AN ALPHA-HELICAL COILED COIL
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle