YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|1633124, gi\|1...
Organism:	Escherichia coli
Length:	142 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1633124, gi|1....

Description	E-value	Query Range	Subject Range
ECOT_ECOL6 - Ecotin OS=Escherichia coli O6 GN=eco PE=3 SV=2 ECOT_ECOL6 - Ecotin OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=eco PE=3 SV=2 ECOT_ECO24 - Ecotin OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=eco PE=3 SV=1 sp\|B7UFM3\|ECOT_ECO27 - Ecotin OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=eco PE=3 SV=1 gi\|75243025, gi\|... - gi\|75243025\|ref\|ZP_00726731.1\| COG4574: Serine protease inhibitor ecotin [Escherichia coli F11], gi\|... gi\|75231453, gi\|... - gi\|75231453\|ref\|ZP_00717822.1\| COG4574: Serine protease inhibitor ecotin [Escherichia coli B7A], gi\|... ECOT_ECOLU - Ecotin OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=eco PE=3 SV=1 ECOT_ECOL5 - Ecotin OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=eco PE=3 SV=1 ECOT_ECOSM - Ecotin OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=eco PE=3 SV=1 ECOT_ECO81 - Ecotin OS=Escherichia coli O81 (strain ED1a) GN=eco PE=3 SV=1 ECOT_ECO55 - Ecotin OS=Escherichia coli (strain 55989 / EAEC) GN=eco PE=3 SV=1 ECOT_ECOSE - Ecotin OS=Escherichia coli (strain SE11) GN=eco PE=3 SV=1 ECOT_ECO27 - Ecotin OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=eco PE=3 SV=1	237.0	[0..1]	[142..21]
ECOT_ECOLI - Ecotin precursor - Escherichia coli ECOT_ECOLC - Ecotin OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=eco PE=3 SV=1 ECOT_ECO8A - Ecotin OS=Escherichia coli O8 (strain IAI1) GN=eco PE=3 SV=1 EG10255 - ecotin, a serine protease inhibitor / Ecotin, serine protease inhibitor ECOT_ECOBW - Ecotin OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=eco PE=3 SV=1 gi\|83588193, gi\|... - gi\|83588193\|ref\|ZP_00926818.1\| COG4574: Serine protease inhibitor ecotin [Escherichia coli 101-1], g... gi\|242377845, gi... - gi\|251785572\|ref\|YP_002999876.1\| hypothetical protein B21_02095 [Escherichia coli BL21], gi\|24237784... gi\|253772866, gi... - gi\|254288982\|ref\|YP_003054730.1\| ecotin precursor [Escherichia coli BL21(DE3)], gi\|253978289\|gb\|ACT4... gi\|253974122, gi... - gi\|254162221\|ref\|YP_003045329.1\| ecotin precursor [Escherichia coli B str. REL606], gi\|253974122\|gb\|... gi\|1736850, gi\|8... - gi\|89109025\|ref\|AP_002805.1\| ecotin, a serine protease inhibitor [Escherichia coli str. K-12 substr.... ECOT_ECODH - Ecotin OS=Escherichia coli (strain K12 / DH10B) GN=eco PE=3 SV=1 EG10255 - ecotin, a serine protease inhibitor / Ecotin, serine protease inhibitor gi\|192931920, gi... - gi\|75259681\|ref\|ZP_00730983.1\| COG4574: Serine protease inhibitor ecotin [Escherichia coli E22], gi\|... gi\|188494287, gi... - gi\|75514427\|ref\|ZP_00736705.1\| COG4574: Serine protease inhibitor ecotin [Escherichia coli 53638], g... ECOT_ECOHS - Ecotin OS=Escherichia coli O9:H4 (strain HS) GN=eco PE=3 SV=1 gi\|75211625, gi\|... - gi\|75211625\|ref\|ZP_00711704.1\| COG4574: Serine protease inhibitor ecotin [Escherichia coli B171], gi...	236.0	[0..1]	[142..21]
gi\|227835617, gi... - gi\|227887267\|ref\|ZP_04005072.1\| ecotin precursor [Escherichia coli 83972], gi\|227835617\|gb\|EEJ46083.... gi\|26109001, gi\|... - gi\|26248596\|ref\|NP_754636.1\| ecotin precursor [Escherichia coli CFT073], gi\|26109001\|gb\|AAN81204.1\|A...	236.0	[0..1]	[142..28]
gi\|124526378, gi... - gi\|124526378\|ref\|ZP_01698331.1\| proteinase inhibitor I11, ecotin [Escherichia coli B], gi\|124501849\|... gi\|453992 - gi\|453992\|gb\|AAA16410.1\| ecotin (protease inhibitor) [Escherichia coli]	236.0	[0..1]	[142..28]
ECOT_ECO57 - Ecotin OS=Escherichia coli O157:H7 GN=eco PE=3 SV=1 gi\|15832352, gi\|... - gi\|15832352\|ref\|NP_311125.1\| ecotin [Escherichia coli O157:H7 str. Sakai], gi\|13362567\|dbj\|BAB36521.... gi\|217327796, gi... - gi\|217327796\|ref\|ZP_03443879.1\| ecotin [Escherichia coli O157:H7 str. TW14588], gi\|217320163\|gb\|EEC2... gi\|208812913, gi... - gi\|208812913\|ref\|ZP_03254242.1\| ecotin [Escherichia coli O157:H7 str. EC4045], gi\|208734190\|gb\|EDZ82... gi\|208726383, gi... - gi\|208806582\|ref\|ZP_03248919.1\| ecotin [Escherichia coli O157:H7 str. EC4206], gi\|208726383\|gb\|EDZ75... ECOT_ECO5E - Ecotin OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=eco PE=3 SV=1 gi\|208739283, gi... - gi\|208819160\|ref\|ZP_03259480.1\| ecotin [Escherichia coli O157:H7 str. EC4042], gi\|208739283\|gb\|EDZ86... gi\|209765696, gi... - pir\|\|D85860 ecotin, a serine proteinase inhibitor [imported] - Escherichia coli (strain O157:H7, sub... gi\|189372950, gi... - gi\|189372950\|gb\|EDU91366.1\| ecotin [Escherichia coli O157:H7 str. EC869], gi\|168787119\|ref\|ZP_028121... gi\|168780062, gi... - gi\|189002110\|gb\|EDU71096.1\| ecotin [Escherichia coli O157:H7 str. EC4076], gi\|168780062\|ref\|ZP_02805... gi\|195935590 - gi\|195935590\|ref\|ZP_03080972.1\| ecotin precursor [Escherichia coli O157:H7 str. EC4024] gi\|12516544, gi\|... - gi\|15802762\|ref\|NP_288789.1\| ecotin precursor [Escherichia coli O157:H7 EDL933], gi\|12516544\|gb\|AAG5... gi\|189375587, gi... - gi\|189375587\|gb\|EDU94003.1\| ecotin [Escherichia coli O157:H7 str. EC508], gi\|168802425\|ref\|ZP_028274... gi\|189365341, gi... - gi\|189365341\|gb\|EDU83757.1\| ecotin [Escherichia coli O157:H7 str. EC4501], gi\|168764705\|ref\|ZP_02789... gi\|189357670, gi... - gi\|189357670\|gb\|EDU76089.1\| ecotin [Escherichia coli O157:H7 str. EC4401], gi\|168754960\|ref\|ZP_02779... gi\|168773069, gi... - gi\|187771038\|gb\|EDU34882.1\| ecotin [Escherichia coli O157:H7 str. EC4196], gi\|168773069\|ref\|ZP_02798... gi\|189362775, gi... - gi\|189362775\|gb\|EDU81194.1\| ecotin [Escherichia coli O157:H7 str. EC4486], gi\|168767833\|ref\|ZP_02792... gi\|168749616, gi... - gi\|188016092\|gb\|EDU54214.1\| ecotin [Escherichia coli O157:H7 str. EC4113], gi\|168749616\|ref\|ZP_02774... gi\|254593508, gi... - gi\|254794108\|ref\|YP_003078945.1\| ecotin, a serine protease inhibitor [Escherichia coli O157:H7 str. ...	236.0	[0..1]	[142..21]
ECOT_SHIB3 - Ecotin OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=eco PE=3 SV=1 gi\|194434228, gi... - gi\|194434228\|ref\|ZP_03066495.1\| ecotin [Shigella dysenteriae 1012], gi\|194417557\|gb\|EDX33659.1\| ecot... gi\|192958516, gi... - gi\|75238003\|ref\|ZP_00722008.1\| COG4574: Serine protease inhibitor ecotin [Escherichia coli E110019],... ECOT_SHIBS - Ecotin OS=Shigella boydii serotype 4 (strain Sb227) GN=eco PE=3 SV=1	236.0	[0..1]	[142..21]
gi\|91073075, gi\|... - gi\|91211501\|ref\|YP_541487.1\| ecotin precursor [Escherichia coli UTI89], gi\|91073075\|gb\|ABE07956.1\| e...	235.0	[0..1]	[142..28]
ECOT_SHIF8 - Ecotin OS=Shigella flexneri serotype 5b (strain 8401) GN=eco PE=3 SV=1 ECOT_SHIFL - Ecotin OS=Shigella flexneri GN=eco PE=3 SV=2 gi\|30041902, gi\|... - gi\|30063649\|ref\|NP_837820.1\| ecotin precursor [Shigella flexneri 2a str. 2457T], gi\|30041902\|gb\|AAP1... gi\|56480066, gi\|... - gi\|56480066\|ref\|NP_708105.2\| ecotin precursor [Shigella flexneri 2a str. 301], gi\|56383617\|gb\|AAN438...	234.0	[0..1]	[142..21]

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Predicted Domain #1

Region A:
Residues: [1-142]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AESVQPLEKI APYPQAEKGM KRQVIQLTPQ EDESTLKVEL LIGQTLEVDC NLHRLGGKLE  60
   61 NKTLEGWGYD YYVFDKVSSP VSTMMHCPDG KKEKKFVTAY LGDAGMLRYN SKLPIVVYTP 120
  121 DNVDVKYRVW KAEEKIDNAV VR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	62.39794
Match:	1azzC
Description:	Ecotin, trypsin inhibitor
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits