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View MS Result Peptides

Run Information:

Bait Protein: gi|14317902, gi|...
Hit Protein: gi|21264367
Protein Desc: ref|NP_005378.3| nucleoporin 98kD isoform 3 [Homo sapiens]
Sequence Coverage: 6.0%
Organism: Homo sapiens
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MFNKSFGTPF GGGTGGFGTT STFGQNTGFG TTSGGAFGTS AFGSSNNTGG LFGNSQTKPG  60
   61  GLFGTSSFSQ PATSTSTGFG FGTSTGTANT LFGTASTGTS LFSSQNNAFA QNKPTGFGNF 120
  121  GTSTSSGGLF GTTNTTSNPF GSTSGSLFGP SSFTAAPTGT TIKFNPPTGT DTMVKAGVST 180
  181  NISTKHQCIT AMKEYESKSL EELRLEDYQA NRKGPQNQVG AGTTTGLFGS SPATSSATGL 240
  241  FSSSTTNSGF AYGQNKTAFG TSTTGFGTNP GGLFGQQNQQ TTSLFSKPFG QATTTQNTGF 300
  301  SFGNTSTIGQ PSTNTMGLFG VTQASQPGGL FGTATNTSTG TAFGTGTGLF GQTNTGFGAV 360
  361  GSTLFGNNKL TTFGSSTTSA PSFGTTSGGL FGFGTNTSGN SIFGSKPAPG TLGTGLGAGF 420
  421  GTALGAGQAS LFGNNQPKIG GPLGTGAFGA PGFNTTTATL GFGAPQAPVA LTDPNASAAQ 480
  481  QAVLQQHINS LTYSPFGDSP LFRNPMSDPK KKEERLKPTN PAAQKALTTP THYKLTPRPA 540
  541  TRVRPKALQT TGTAKSHLFD GLDDDEPSLA NGAFMPKKSI KKLVLKNLNN SNLFSPVNRD 600
  601  SENLASPSEY PENGERFSFL SKPVDENHQQ DGDEDSLVSH FYTNPIAKPI PQTPESAGNK 660
  661  HSNSNSVDDT IVALNMRAAL RNGLEGSSEE TSFHDESLQD DREEIENNSY HMHPAGIILT 720
  721  KVGYYTIPSM DDLAKITNVK GECIVSDFTI GRKGYGSIYF EGDVNLTNLN LDDIVHIRRK 780
  781  EVVVYLDDNQ KPPVGEGLNR KAEVTLDGVW PTDKTSRCLI KSPDRLADIN YEGRLEAVSR 840
  841  KQGAQFKEYR PETGSWVFKV SHFSKYGLQD SDEEEEEHPS KTSTKKLKTA PLPPASQTTP 900
  901  LQMALNGKPA PPPQSQSPEV EQLGRVVELD SDMVDITQEP VLDTMLEESM PEDQEPVSAS 960
  961  THIASSLGIN PHVLQIMKAS LLTDEEDVDM ALDQRFSRLP SKADTSQEIC SPRLPISASH1020
 1021  SSKTRSLVGG LLQSKFTSGA FLSPSVSVQE CRTPRAASLM NIPSTSSWSV PPPLTSVFTM1080
 1081  PSPAPEVPLK TVGTRRQLGL VPREKSVTYG KGKLLMDMAL FMGRSFRVGW GPNWTLANSG1140
 1141  EQLNGSHELE NHQIADSMEF GFLPNPVAVK PLTESPFKVH LEKLSLRQRK PDEDMKLYQT1200
 1201  PLELKLKHST VHVDELCPLI VPNLGVAVIH DYADWVKEAS GDLPEAQIVK HWSLTWTLCE1260
 1261  ALWGHLKELD SQLNEPREYI QILERRRAFS RWLSCTATPQ IEEEVSLTQK NSPVEAVFSY1320
 1321  LTGKRISEAC SLAQQSGDHR LALLLSQFVG SQSVRELLTM QLVDWHQLQA DSFIQDERLR1380
 1381  IFALLAGKPV WQLSEKKQIN VCSQLDWKRS LAIHLWYLLP PTASISRALS MYEEAFQNTS1440
 1441  DSDRYACSPL PSYLEGSGCV IAEEQNSQTP LRDVCFHLLK LYSDRHYDLN QLLEPRSITA1500
 1501  DPLDYRLSWH LWEVLRDLKY THLSAQCEGV LQASYAGQLE SEGLWEWAIF VLLHIDNSGI1560
 1561  REKAVRELLT RHCQLLETPE SWAKETFLTQ KLRVPAKWIH EAKAVRAHME SDKHLEALCL1620
 1621  FKAEHWNRCH KLIIRHLASD AIINENYDYL KGFLEDLAPP ERSSLIQDWE TSGLVYLDYI1680
 1681  RVIEMLRHIQ QVEHFNDSNI VQVMTWSSYT SK

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 3.3025 0.1782 2268.61 9618.9 2 40.9 1 T.NTMGLFGVTQASQPGGLFGTATN.T
[No Spectrum] 2.5011 0.217 1814.77 8658.7 5 43.3 1 H.INSLTYSPFGDSPLFR.N
[No Spectrum] 3.6434 0.4148 2376.33 6933.6 1 35.7 1 K.SHLFDGLDDDEPSLANGAFMPK.K
[No Spectrum] 2.8259 0.2328 1489.39 8823.8 1 58.3 1 K.NLNNSNLFSPVNR.D
[No Spectrum] 2.8118 0.1385 1562.11 8419.8 1 61.5 1 R.KAEVTLDGVWPTDK.T
[No Spectrum] 2.6737 0.1701 1620.37 13006.8 1 53.6 1 R.LALLLSQFVGSQSVR.E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle