| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.675462762544] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| polarisome | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| actin cap | 3.811E-3 | 2 | 12 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cell cycle cytokinesis | 1.5966E-4 | 2 | 80 | 2 | 6292 |
| cytokinetic process | 2.1151E-4 | 2 | 92 | 2 | 6292 |
| cytokinesis | 3.1407E-4 | 2 | 112 | 2 | 6292 |
| actin cytoskeleton organization | 3.1973E-4 | 2 | 113 | 2 | 6292 |
| actin filament-based process | 3.4287E-4 | 2 | 117 | 2 | 6292 |
| cell division | 5.275E-4 | 2 | 145 | 2 | 6292 |
| establishment of vesicle localization | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| vesicle targeting | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| actomyosin structure organization | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| cytokinesis, actomyosin contractile ring assembly | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| assembly of actomyosin apparatus involved in cell cycle cytokinesis | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| vesicle localization | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| cytoskeleton organization | 1.3422E-3 | 2 | 231 | 2 | 6292 |
| cell cycle process | 6.0534E-3 | 2 | 490 | 2 | 6292 |
| Rho protein signal transduction | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| cell cycle | 6.95E-3 | 2 | 525 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| myosin heavy chain binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| myosin II heavy chain binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| myosin V binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| myosin II binding | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| myosin binding | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| cytoskeletal regulatory protein binding | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |