| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.037] [SVM Score: 0.716278094866] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| BOI2 |
|
|
|
| BUD6 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| polarisome | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| actin cap | 3.811E-3 | 2 | 12 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| Rho protein signal transduction | 9.6001E-6 | 2 | 20 | 2 | 6292 |
| Ras protein signal transduction | 4.1432E-5 | 2 | 41 | 2 | 6292 |
| small GTPase mediated signal transduction | 1.0186E-4 | 2 | 64 | 2 | 6292 |
| intracellular signal transduction | 3.312E-4 | 2 | 115 | 2 | 6292 |
| intracellular signaling pathway | 5.2022E-4 | 2 | 144 | 2 | 6292 |
| signaling pathway | 8.5067E-4 | 2 | 184 | 2 | 6292 |
| signal transduction | 1.1516E-3 | 2 | 214 | 2 | 6292 |
| signaling process | 1.1841E-3 | 2 | 217 | 2 | 6292 |
| signal transmission | 1.1841E-3 | 2 | 217 | 2 | 6292 |
| signaling | 1.598E-3 | 2 | 252 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytoskeletal regulatory protein binding | 1.9064E-3 | 2 | 6 | 1 | 6292 |