| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.896626585675] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cortical actin cytoskeleton | 6.6999E-5 | 2 | 52 | 2 | 6292 |
| cortical cytoskeleton | 6.6999E-5 | 2 | 52 | 2 | 6292 |
| actin cytoskeleton | 1.8038E-4 | 2 | 85 | 2 | 6292 |
| cell cortex part | 2.304E-4 | 2 | 96 | 2 | 6292 |
| cell cortex | 2.974E-4 | 2 | 109 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| polarisome | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| membrane raft | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| actin cap | 3.811E-3 | 2 | 12 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| cytoskeletal regulatory protein binding | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |