YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.73956067378]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
DCW1
  • membrane fraction
  • anchored to plasma membrane
    		•
  • fungal-type cell wall biogenesis
  • budding cell bud growth
    		•
  • mannosidase activity
    		•
    DFG5
  • anchored to plasma membrane
    		•
  • fungal-type cell wall biogenesis
  • pseudohyphal growth
  • budding cell bud growth
    		•
  • mannosidase activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    anchored to plasma membrane 3.0316E-7 2 4 2 6292
    anchored to membrane 3.0316E-7 2 4 2 6292
    intrinsic to plasma membrane 2.6678E-5 2 33 2 6292
    plasma membrane part 8.0641E-5 2 57 2 6292
    intrinsic to membrane 1.7276E-3 2 262 2 6292
    plasma membrane 1.8077E-3 2 268 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    budding cell bud growth 2.8346E-5 2 34 2 6292
    fungal-type cell wall biogenesis 7.2304E-5 2 54 2 6292
    cell wall biogenesis 1.5966E-4 2 80 2 6292
    cell budding 2.0236E-4 2 90 2 6292
    asexual reproduction 2.0236E-4 2 90 2 6292
    cell division 5.275E-4 2 145 2 6292
    growth 5.275E-4 2 145 2 6292
    cellular cell wall organization or biogenesis 1.0877E-3 2 208 2 6292
    cell wall organization or biogenesis 1.0877E-3 2 208 2 6292
    reproduction of a single-celled organism 1.1841E-3 2 217 2 6292
    reproduction 2.7096E-3 2 328 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    mannosidase activity 3.0316E-7 2 4 2 6292
    hydrolase activity, hydrolyzing O-glycosyl compounds 3.3651E-5 2 37 2 6292
    hydrolase activity, acting on glycosyl bonds 4.7798E-5 2 44 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle