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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.04] [SVM Score: 0.35830690019]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

lipid glycosylation 3.1786E-4 2 1 1 6292
cellular lipid metabolic process 8.5067E-4 2 184 2 6292
phosphatidylethanolamine metabolic process 1.2712E-3 2 4 1 6292
ethanolamine biosynthetic process 1.2712E-3 2 4 1 6292
phosphatidylethanolamine biosynthetic process 1.2712E-3 2 4 1 6292
ethanolamine metabolic process 1.2712E-3 2 4 1 6292
nucleotide-sugar transport 1.2712E-3 2 4 1 6292
lipid metabolic process 1.4491E-3 2 240 2 6292
ethanolamine and derivative metabolic process 4.7627E-3 2 15 1 6292
cellular biogenic amine biosynthetic process 6.3477E-3 2 20 1 6292
lipid modification 7.6148E-3 2 24 1 6292
cellular amino acid derivative biosynthetic process 8.8811E-3 2 28 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ethanolaminephosphotransferase activity 3.1786E-4 2 1 1 6292
nucleotide-sugar transmembrane transporter activity 1.2712E-3 2 4 1 6292
CDP-alcohol phosphatidyltransferase activity 2.859E-3 2 9 1 6292
phosphotransferase activity, for other substituted phosphate groups 6.0308E-3 2 19 1 6292
carbohydrate transmembrane transporter activity 9.5139E-3 2 30 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle