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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.057] [SVM Score: 0.417592269272]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
RVS161
  • mating projection
  • membrane raft
  • actin cortical patch
    		•
  • bipolar cellular bud site selection
  • response to osmotic stress
  • endocytosis
    		•
  • cytoskeletal protein binding
    		•
    SAC6
  • actin cortical patch
    		•
  • bipolar cellular bud site selection
  • response to osmotic stress
  • actin filament organization
  • endocytosis
    		•
  • actin filament binding
  • protein binding, bridging
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    actin cortical patch 4.1432E-5 2 41 2 6292
    cortical actin cytoskeleton 6.6999E-5 2 52 2 6292
    cortical cytoskeleton 6.6999E-5 2 52 2 6292
    actin cytoskeleton 1.8038E-4 2 85 2 6292
    cell cortex part 2.304E-4 2 96 2 6292
    cell cortex 2.974E-4 2 109 2 6292
    cytoskeletal part 1.0156E-3 2 201 2 6292
    cytoskeleton 1.1732E-3 2 216 2 6292
    membrane raft 2.5415E-3 2 8 1 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    bipolar cellular bud site selection 2.8346E-5 2 34 2 6292
    cellular bud site selection 1.3647E-4 2 74 2 6292
    cytokinesis, site selection 1.3647E-4 2 74 2 6292
    response to osmotic stress 1.4784E-4 2 77 2 6292
    cell cycle cytokinesis 1.5966E-4 2 80 2 6292
    establishment of cell polarity 1.7614E-4 2 84 2 6292
    establishment or maintenance of cell polarity 1.8038E-4 2 85 2 6292
    endocytosis 1.9342E-4 2 88 2 6292
    cell budding 2.0236E-4 2 90 2 6292
    asexual reproduction 2.0236E-4 2 90 2 6292
    cytokinetic process 2.1151E-4 2 92 2 6292
    membrane invagination 2.2085E-4 2 94 2 6292
    cytokinesis 3.1407E-4 2 112 2 6292
    response to abiotic stimulus 3.4287E-4 2 117 2 6292
    cell morphogenesis 3.9158E-4 2 125 2 6292
    cellular component morphogenesis 4.7763E-4 2 138 2 6292
    cell division 5.275E-4 2 145 2 6292
    membrane organization 9.8542E-4 2 198 2 6292
    cellular membrane organization 9.8542E-4 2 198 2 6292
    reproduction of a single-celled organism 1.1841E-3 2 217 2 6292
    anatomical structure morphogenesis 1.6621E-3 2 257 2 6292
    anatomical structure development 1.7012E-3 2 260 2 6292
    cellular developmental process 1.9175E-3 2 276 2 6292
    reproduction 2.7096E-3 2 328 2 6292
    developmental process 2.7595E-3 2 331 2 6292
    vesicle-mediated transport 2.9119E-3 2 340 2 6292
    cell cycle process 6.0534E-3 2 490 2 6292
    response to stress 6.2277E-3 2 497 2 6292
    cell cycle 6.95E-3 2 525 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    cytoskeletal protein binding 8.6451E-5 2 59 2 6292
    actin filament binding 3.811E-3 2 12 1 6292
    protein binding, bridging 6.3477E-3 2 20 1 6292
    actin binding 6.6645E-3 2 21 1 6292
    protein binding 9.4468E-3 2 612 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle