| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.436479580217] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cell cortex part | 2.304E-4 | 2 | 96 | 2 | 6292 |
| cell cortex | 2.974E-4 | 2 | 109 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| septin ring | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| septin cytoskeleton | 4.7627E-3 | 2 | 15 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytokinetic process | 2.1151E-4 | 2 | 92 | 2 | 6292 |
| cytokinesis | 3.1407E-4 | 2 | 112 | 2 | 6292 |
| asymmetric protein localization | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| cell division | 5.275E-4 | 2 | 145 | 2 | 6292 |
| barrier septum formation | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| aminoglycan biosynthetic process | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| chitin biosynthetic process | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| cellular component assembly | 3.7349E-3 | 2 | 385 | 2 | 6292 |
| aminoglycan metabolic process | 4.1283E-3 | 2 | 13 | 1 | 6292 |
| chitin metabolic process | 4.1283E-3 | 2 | 13 | 1 | 6292 |
| actin cortical patch assembly | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| cortical actin cytoskeleton organization | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| cortical cytoskeleton organization | 4.7627E-3 | 2 | 15 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ubiquitin binding | 2.224E-3 | 2 | 7 | 1 | 6292 |
| small conjugating protein binding | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| protein binding, bridging | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |