| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.476281534637] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| Golgi apparatus | 7.3441E-4 | 2 | 171 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| lipid modification | 1.3945E-5 | 2 | 24 | 2 | 6292 |
| lipid glycosylation | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| cellular lipid metabolic process | 8.5067E-4 | 2 | 184 | 2 | 6292 |
| nucleotide-sugar transport | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| lipid metabolic process | 1.4491E-3 | 2 | 240 | 2 | 6292 |
| phosphoinositide phosphorylation | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| lipid phosphorylation | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| phosphoinositide-mediated signaling | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| inositol lipid-mediated signaling | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| second-messenger-mediated signaling | 9.5139E-3 | 2 | 30 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| 1-phosphatidylinositol 4-kinase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| nucleotide-sugar transmembrane transporter activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| lipid kinase activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| inositol or phosphatidylinositol kinase activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| carbohydrate transmembrane transporter activity | 9.5139E-3 | 2 | 30 | 1 | 6292 |