| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.510513410799] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| PEX10 |
|
|
|
| PEX5 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microbody | 8.3521E-5 | 2 | 58 | 2 | 6292 |
| peroxisome | 8.3521E-5 | 2 | 58 | 2 | 6292 |
| peroxisomal membrane | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| microbody membrane | 7.2981E-3 | 2 | 23 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| peroxisome organization | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| peroxisomal transport | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| protein targeting to peroxisome | 5.0798E-3 | 2 | 16 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| peroxisome matrix targeting signal-1 binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| peroxisome targeting sequence binding | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| peptide binding | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| signal sequence binding | 5.7138E-3 | 2 | 18 | 1 | 6292 |