From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.054] [SVM Score: 0.555284589926] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
ABP140 |
|
|
|
CRN1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
actin cytoskeleton | 1.8038E-4 | 2 | 85 | 2 | 6292 |
cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
actin filament | 2.859E-3 | 2 | 9 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
actin cytoskeleton organization | 3.1973E-4 | 2 | 113 | 2 | 6292 |
actin filament-based process | 3.4287E-4 | 2 | 117 | 2 | 6292 |
cytoskeleton organization | 1.3422E-3 | 2 | 231 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
actin filament binding | 3.3348E-6 | 2 | 12 | 2 | 6292 |
protein binding, bridging | 9.6001E-6 | 2 | 20 | 2 | 6292 |
actin binding | 1.0611E-5 | 2 | 21 | 2 | 6292 |
cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
microtubule binding | 3.1764E-3 | 2 | 10 | 1 | 6292 |
tubulin binding | 6.3477E-3 | 2 | 20 | 1 | 6292 |
protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |