| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.560942120908] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| GIP2 |
|
|
|
| RCN1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein serine/threonine phosphatase complex | 6.8716E-6 | 2 | 17 | 2 | 6292 |
| calcineurin complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| protein phosphatase type 1 complex | 2.224E-3 | 2 | 7 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| calcium-mediated signaling | 2.224E-3 | 2 | 7 | 1 | 6292 |
| protein amino acid dephosphorylation | 8.8811E-3 | 2 | 28 | 1 | 6292 |
| second-messenger-mediated signaling | 9.5139E-3 | 2 | 30 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| phosphatase regulator activity | 1.2783E-5 | 2 | 23 | 2 | 6292 |
| protein phosphatase regulator activity | 1.2783E-5 | 2 | 23 | 2 | 6292 |
| calcium-dependent protein serine/threonine phosphatase regulator activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| enzyme regulator activity | 1.0773E-3 | 2 | 207 | 2 | 6292 |